Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX6P35712 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.13■□□□□ 0.81
SOX6P35712 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SOX6P35712 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX6P35712 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.12■□□□□ 0.81
SOX6P35712 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX6P35712 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX6P35712 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.12■□□□□ 0.81
SOX6P35712 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX6P35712 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.12■□□□□ 0.81
SOX6P35712 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX6P35712 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SOX6P35712 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX6P35712 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
SOX6P35712 AC016575.1-201ENST00000607026 382 ntBASIC20.11■□□□□ 0.81
SOX6P35712 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX6P35712 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX6P35712 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SOX6P35712 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX6P35712 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX6P35712 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SOX6P35712 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX6P35712 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX6P35712 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
SOX6P35712 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SOX6P35712 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX6P35712 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SOX6P35712 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.09■□□□□ 0.81
SOX6P35712 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX6P35712 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.09■□□□□ 0.81
SOX6P35712 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX6P35712 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SOX6P35712 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.08■□□□□ 0.81
SOX6P35712 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SOX6P35712 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SOX6P35712 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
SOX6P35712 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
SOX6P35712 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.08■□□□□ 0.8
SOX6P35712 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX6P35712 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX6P35712 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX6P35712 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX6P35712 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SOX6P35712 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX6P35712 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SOX6P35712 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX6P35712 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SOX6P35712 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.07■□□□□ 0.8
SOX6P35712 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.07■□□□□ 0.8
SOX6P35712 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SOX6P35712 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX6P35712 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX6P35712 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.07■□□□□ 0.8
SOX6P35712 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX6P35712 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX6P35712 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX6P35712 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX6P35712 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX6P35712 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.07■□□□□ 0.8
SOX6P35712 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SOX6P35712 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SOX6P35712 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.06■□□□□ 0.8
SOX6P35712 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SOX6P35712 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SOX6P35712 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.05■□□□□ 0.8
SOX6P35712 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SOX6P35712 HLA-V-202ENST00000446817 847 ntBASIC20.05■□□□□ 0.8
SOX6P35712 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SOX6P35712 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SOX6P35712 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
SOX6P35712 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.05■□□□□ 0.8
SOX6P35712 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SOX6P35712 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SOX6P35712 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SOX6P35712 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SOX6P35712 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SOX6P35712 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SOX6P35712 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SOX6P35712 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SOX6P35712 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SOX6P35712 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.04■□□□□ 0.8
SOX6P35712 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SOX6P35712 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SOX6P35712 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SOX6P35712 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.04■□□□□ 0.8
SOX6P35712 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.04■□□□□ 0.8
SOX6P35712 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.03■□□□□ 0.8
SOX6P35712 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms