Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD40P25942 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CD40P25942 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD40P25942 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD40P25942 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.45■□□□□ 0.7
CD40P25942 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD40P25942 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD40P25942 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD40P25942 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD40P25942 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CD40P25942 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD40P25942 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD40P25942 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD40P25942 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD40P25942 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CD40P25942 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD40P25942 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD40P25942 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.44■□□□□ 0.7
CD40P25942 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.44■□□□□ 0.7
CD40P25942 AF213884.3-201ENST00000563833 479 ntBASIC19.44■□□□□ 0.7
CD40P25942 AC136469.2-201ENST00000623944 1028 ntBASIC19.44■□□□□ 0.7
CD40P25942 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD40P25942 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD40P25942 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD40P25942 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD40P25942 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD40P25942 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD40P25942 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD40P25942 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CD40P25942 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD40P25942 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD40P25942 AP001330.3-201ENST00000520123 633 ntBASIC19.43■□□□□ 0.7
CD40P25942 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.43■□□□□ 0.7
CD40P25942 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.43■□□□□ 0.7
CD40P25942 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.43■□□□□ 0.7
CD40P25942 pRNA.6-201ENST00000610482 90 ntBASIC19.43■□□□□ 0.7
CD40P25942 pRNA.5-201ENST00000612139 90 ntBASIC19.43■□□□□ 0.7
CD40P25942 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.43■□□□□ 0.7
CD40P25942 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.43■□□□□ 0.7
CD40P25942 pRNA.11-201ENST00000618423 90 ntBASIC19.43■□□□□ 0.7
CD40P25942 pRNA.13-201ENST00000619112 90 ntBASIC19.43■□□□□ 0.7
CD40P25942 AL136967.2-201ENST00000623968 743 ntBASIC19.43■□□□□ 0.7
CD40P25942 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD40P25942 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD40P25942 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.42■□□□□ 0.7
CD40P25942 AC004812.2-201ENST00000611079 2094 ntBASIC19.42■□□□□ 0.7
CD40P25942 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD40P25942 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD40P25942 MIR935-201ENST00000401179 91 ntBASIC19.42■□□□□ 0.7
CD40P25942 MIR939-201ENST00000401314 82 ntBASIC19.42■□□□□ 0.7
CD40P25942 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.42■□□□□ 0.7
CD40P25942 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CD40P25942 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD40P25942 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD40P25942 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD40P25942 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD40P25942 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD40P25942 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.41■□□□□ 0.7
CD40P25942 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD40P25942 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
CD40P25942 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
CD40P25942 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD40P25942 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CD40P25942 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.41■□□□□ 0.7
CD40P25942 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD40P25942 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD40P25942 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.4■□□□□ 0.7
CD40P25942 AC091305.1-201ENST00000479476 895 ntBASIC19.4■□□□□ 0.7
CD40P25942 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CD40P25942 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.4■□□□□ 0.7
CD40P25942 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CD40P25942 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CD40P25942 FP325331.1-202ENST00000623531 1380 ntBASIC19.4■□□□□ 0.7
CD40P25942 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CD40P25942 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CD40P25942 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CD40P25942 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.39■□□□□ 0.7
CD40P25942 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.39■□□□□ 0.7
CD40P25942 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD40P25942 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.39■□□□□ 0.69
CD40P25942 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.39■□□□□ 0.69
CD40P25942 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CD40P25942 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD40P25942 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.39■□□□□ 0.69
CD40P25942 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD40P25942 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD40P25942 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD40P25942 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD40P25942 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.38■□□□□ 0.69
CD40P25942 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD40P25942 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.38■□□□□ 0.69
CD40P25942 AC027682.1-201ENST00000562846 899 ntBASIC19.38■□□□□ 0.69
CD40P25942 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD40P25942 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CD40P25942 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CD40P25942 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CD40P25942 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD40P25942 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD40P25942 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD40P25942 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms