Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PSMC3P17980 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PSMC3P17980 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
PSMC3P17980 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
PSMC3P17980 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
PSMC3P17980 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PSMC3P17980 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.43■■□□□ 1.34
PSMC3P17980 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PSMC3P17980 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PSMC3P17980 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.42■■□□□ 1.34
PSMC3P17980 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
PSMC3P17980 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PSMC3P17980 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PSMC3P17980 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.42■■□□□ 1.34
PSMC3P17980 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.42■■□□□ 1.34
PSMC3P17980 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.42■■□□□ 1.34
PSMC3P17980 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PSMC3P17980 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PSMC3P17980 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.42■■□□□ 1.34
PSMC3P17980 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PSMC3P17980 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.41■■□□□ 1.34
PSMC3P17980 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PSMC3P17980 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PSMC3P17980 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.41■■□□□ 1.34
PSMC3P17980 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PSMC3P17980 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.41■■□□□ 1.34
PSMC3P17980 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PSMC3P17980 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PSMC3P17980 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
PSMC3P17980 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.41■■□□□ 1.34
PSMC3P17980 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PSMC3P17980 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PSMC3P17980 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PSMC3P17980 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PSMC3P17980 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PSMC3P17980 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.4■■□□□ 1.34
PSMC3P17980 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.4■■□□□ 1.34
PSMC3P17980 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.4■■□□□ 1.34
PSMC3P17980 pRNA.6-201ENST00000610482 90 ntBASIC23.4■■□□□ 1.34
PSMC3P17980 pRNA.5-201ENST00000612139 90 ntBASIC23.4■■□□□ 1.34
PSMC3P17980 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.4■■□□□ 1.34
PSMC3P17980 pRNA.11-201ENST00000618423 90 ntBASIC23.4■■□□□ 1.34
PSMC3P17980 pRNA.13-201ENST00000619112 90 ntBASIC23.4■■□□□ 1.34
PSMC3P17980 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
PSMC3P17980 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PSMC3P17980 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.4■■□□□ 1.34
PSMC3P17980 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PSMC3P17980 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PSMC3P17980 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PSMC3P17980 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.39■■□□□ 1.34
PSMC3P17980 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
PSMC3P17980 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PSMC3P17980 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PSMC3P17980 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PSMC3P17980 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PSMC3P17980 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.39■■□□□ 1.33
PSMC3P17980 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PSMC3P17980 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.38■■□□□ 1.33
PSMC3P17980 HLA-L-211ENST00000482052 1765 ntBASIC23.38■■□□□ 1.33
PSMC3P17980 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PSMC3P17980 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.38■■□□□ 1.33
PSMC3P17980 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.38■■□□□ 1.33
PSMC3P17980 AC126544.1-201ENST00000580842 1059 ntBASIC23.38■■□□□ 1.33
PSMC3P17980 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PSMC3P17980 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.38■■□□□ 1.33
PSMC3P17980 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PSMC3P17980 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PSMC3P17980 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.37■■□□□ 1.33
PSMC3P17980 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PSMC3P17980 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PSMC3P17980 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PSMC3P17980 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
PSMC3P17980 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PSMC3P17980 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PSMC3P17980 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
PSMC3P17980 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
PSMC3P17980 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PSMC3P17980 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PSMC3P17980 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.36■■□□□ 1.33
PSMC3P17980 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.36■■□□□ 1.33
PSMC3P17980 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.36■■□□□ 1.33
PSMC3P17980 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PSMC3P17980 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.36■■□□□ 1.33
PSMC3P17980 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PSMC3P17980 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PSMC3P17980 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PSMC3P17980 ALDH1A3-203ENST00000557963 1670 ntBASIC23.35■■□□□ 1.33
PSMC3P17980 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PSMC3P17980 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PSMC3P17980 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.35■■□□□ 1.33
PSMC3P17980 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PSMC3P17980 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.35■■□□□ 1.33
PSMC3P17980 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PSMC3P17980 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PSMC3P17980 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PSMC3P17980 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PSMC3P17980 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PSMC3P17980 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PSMC3P17980 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PSMC3P17980 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms