Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 KRT8P33-201ENST00000508125 1423 ntBASIC21.5■■□□□ 1.03
BCKDHAP12694 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
BCKDHAP12694 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BCKDHAP12694 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.5■■□□□ 1.03
BCKDHAP12694 AC103724.3-201ENST00000564481 992 ntBASIC21.5■■□□□ 1.03
BCKDHAP12694 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.5■■□□□ 1.03
BCKDHAP12694 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.5■■□□□ 1.03
BCKDHAP12694 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
BCKDHAP12694 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.5■■□□□ 1.03
BCKDHAP12694 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
BCKDHAP12694 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BCKDHAP12694 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
BCKDHAP12694 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
BCKDHAP12694 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BCKDHAP12694 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
BCKDHAP12694 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
BCKDHAP12694 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BCKDHAP12694 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BCKDHAP12694 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
BCKDHAP12694 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BCKDHAP12694 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BCKDHAP12694 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.48■■□□□ 1.03
BCKDHAP12694 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
BCKDHAP12694 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BCKDHAP12694 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
BCKDHAP12694 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BCKDHAP12694 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BCKDHAP12694 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.48■■□□□ 1.03
BCKDHAP12694 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BCKDHAP12694 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.48■■□□□ 1.03
BCKDHAP12694 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BCKDHAP12694 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
BCKDHAP12694 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
BCKDHAP12694 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BCKDHAP12694 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.48■■□□□ 1.03
BCKDHAP12694 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BCKDHAP12694 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.47■■□□□ 1.03
BCKDHAP12694 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BCKDHAP12694 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BCKDHAP12694 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BCKDHAP12694 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.47■■□□□ 1.03
BCKDHAP12694 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.47■■□□□ 1.03
BCKDHAP12694 YBX1P4-201ENST00000392794 808 ntBASIC21.47■■□□□ 1.03
BCKDHAP12694 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.47■■□□□ 1.03
BCKDHAP12694 SNX5-217ENST00000606557 1087 ntBASIC21.47■■□□□ 1.03
BCKDHAP12694 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.47■■□□□ 1.03
BCKDHAP12694 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BCKDHAP12694 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BCKDHAP12694 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BCKDHAP12694 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
BCKDHAP12694 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.46■■□□□ 1.03
BCKDHAP12694 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.46■■□□□ 1.03
BCKDHAP12694 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.46■■□□□ 1.03
BCKDHAP12694 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.46■■□□□ 1.03
BCKDHAP12694 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
BCKDHAP12694 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.46■■□□□ 1.03
BCKDHAP12694 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.46■■□□□ 1.03
BCKDHAP12694 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BCKDHAP12694 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BCKDHAP12694 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BCKDHAP12694 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.45■■□□□ 1.03
BCKDHAP12694 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
BCKDHAP12694 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BCKDHAP12694 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BCKDHAP12694 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BCKDHAP12694 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BCKDHAP12694 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BCKDHAP12694 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.44■■□□□ 1.02
BCKDHAP12694 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.44■■□□□ 1.02
BCKDHAP12694 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
BCKDHAP12694 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BCKDHAP12694 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
BCKDHAP12694 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BCKDHAP12694 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
BCKDHAP12694 EP400NL-214ENST00000641289 2402 ntBASIC21.44■■□□□ 1.02
BCKDHAP12694 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHAP12694 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
BCKDHAP12694 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.43■■□□□ 1.02
BCKDHAP12694 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHAP12694 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHAP12694 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHAP12694 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
BCKDHAP12694 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.43■■□□□ 1.02
BCKDHAP12694 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.43■■□□□ 1.02
BCKDHAP12694 AC137630.3-201ENST00000607245 391 ntBASIC21.43■■□□□ 1.02
BCKDHAP12694 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.43■■□□□ 1.02
BCKDHAP12694 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.43■■□□□ 1.02
BCKDHAP12694 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHAP12694 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHAP12694 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHAP12694 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHAP12694 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BCKDHAP12694 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
BCKDHAP12694 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.42■■□□□ 1.02
BCKDHAP12694 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.42■■□□□ 1.02
BCKDHAP12694 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
BCKDHAP12694 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
BCKDHAP12694 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
BCKDHAP12694 AL353803.4-201ENST00000565882 1934 ntBASIC21.42■■□□□ 1.02
BCKDHAP12694 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms