Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFNA1P01562 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.8■□□□□ 0.44
IFNA1P01562 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
IFNA1P01562 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IFNA1P01562 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.8■□□□□ 0.44
IFNA1P01562 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IFNA1P01562 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.8■□□□□ 0.44
IFNA1P01562 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
IFNA1P01562 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.8■□□□□ 0.44
IFNA1P01562 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
IFNA1P01562 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.79■□□□□ 0.44
IFNA1P01562 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
IFNA1P01562 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
IFNA1P01562 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFNA1P01562 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFNA1P01562 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFNA1P01562 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFNA1P01562 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IFNA1P01562 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IFNA1P01562 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFNA1P01562 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFNA1P01562 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFNA1P01562 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
IFNA1P01562 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.79■□□□□ 0.44
IFNA1P01562 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
IFNA1P01562 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IFNA1P01562 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IFNA1P01562 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
IFNA1P01562 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
IFNA1P01562 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.78■□□□□ 0.44
IFNA1P01562 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.78■□□□□ 0.44
IFNA1P01562 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IFNA1P01562 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.78■□□□□ 0.44
IFNA1P01562 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IFNA1P01562 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFNA1P01562 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.77■□□□□ 0.44
IFNA1P01562 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFNA1P01562 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.77■□□□□ 0.44
IFNA1P01562 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
IFNA1P01562 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.77■□□□□ 0.44
IFNA1P01562 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.77■□□□□ 0.44
IFNA1P01562 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
IFNA1P01562 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
IFNA1P01562 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
IFNA1P01562 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IFNA1P01562 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
IFNA1P01562 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IFNA1P01562 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.77■□□□□ 0.43
IFNA1P01562 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IFNA1P01562 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFNA1P01562 AC126177.7-201ENST00000547904 679 ntBASIC17.76■□□□□ 0.43
IFNA1P01562 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFNA1P01562 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFNA1P01562 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFNA1P01562 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
IFNA1P01562 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
IFNA1P01562 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFNA1P01562 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.75■□□□□ 0.43
IFNA1P01562 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFNA1P01562 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
IFNA1P01562 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.75■□□□□ 0.43
IFNA1P01562 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFNA1P01562 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFNA1P01562 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
IFNA1P01562 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFNA1P01562 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFNA1P01562 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.75■□□□□ 0.43
IFNA1P01562 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IFNA1P01562 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
IFNA1P01562 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
IFNA1P01562 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
IFNA1P01562 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFNA1P01562 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.74■□□□□ 0.43
IFNA1P01562 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFNA1P01562 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
IFNA1P01562 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
IFNA1P01562 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IFNA1P01562 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IFNA1P01562 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFNA1P01562 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFNA1P01562 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.73■□□□□ 0.43
IFNA1P01562 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFNA1P01562 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFNA1P01562 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFNA1P01562 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IFNA1P01562 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.73■□□□□ 0.43
IFNA1P01562 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.73■□□□□ 0.43
IFNA1P01562 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFNA1P01562 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
IFNA1P01562 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFNA1P01562 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFNA1P01562 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.72■□□□□ 0.43
IFNA1P01562 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFNA1P01562 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IFNA1P01562 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IFNA1P01562 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFNA1P01562 C11orf96-202ENST00000528572 1834 ntBASIC17.72■□□□□ 0.43
IFNA1P01562 AC092053.2-201ENST00000640557 1818 ntBASIC17.72■□□□□ 0.43
IFNA1P01562 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IFNA1P01562 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms