Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LINC00473A8K010 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.32■□□□□ 0.52
LINC00473A8K010 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00473A8K010 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00473A8K010 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LINC00473A8K010 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00473A8K010 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00473A8K010 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00473A8K010 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.32■□□□□ 0.52
LINC00473A8K010 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.32■□□□□ 0.52
LINC00473A8K010 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00473A8K010 EP400NL-214ENST00000641289 2402 ntBASIC18.32■□□□□ 0.52
LINC00473A8K010 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00473A8K010 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00473A8K010 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00473A8K010 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00473A8K010 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00473A8K010 KRT8P33-201ENST00000508125 1423 ntBASIC18.32■□□□□ 0.52
LINC00473A8K010 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LINC00473A8K010 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00473A8K010 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.31■□□□□ 0.52
LINC00473A8K010 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00473A8K010 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00473A8K010 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00473A8K010 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.31■□□□□ 0.52
LINC00473A8K010 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.31■□□□□ 0.52
LINC00473A8K010 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.31■□□□□ 0.52
LINC00473A8K010 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00473A8K010 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LINC00473A8K010 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00473A8K010 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00473A8K010 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.3■□□□□ 0.52
LINC00473A8K010 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00473A8K010 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
LINC00473A8K010 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00473A8K010 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LINC00473A8K010 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00473A8K010 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.3■□□□□ 0.52
LINC00473A8K010 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.3■□□□□ 0.52
LINC00473A8K010 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.3■□□□□ 0.52
LINC00473A8K010 AC103724.3-201ENST00000564481 992 ntBASIC18.3■□□□□ 0.52
LINC00473A8K010 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LINC00473A8K010 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00473A8K010 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00473A8K010 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LINC00473A8K010 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00473A8K010 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00473A8K010 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00473A8K010 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LINC00473A8K010 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00473A8K010 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LINC00473A8K010 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00473A8K010 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC00473A8K010 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC00473A8K010 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00473A8K010 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00473A8K010 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00473A8K010 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC00473A8K010 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00473A8K010 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00473A8K010 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.28■□□□□ 0.52
LINC00473A8K010 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LINC00473A8K010 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00473A8K010 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00473A8K010 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00473A8K010 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LINC00473A8K010 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC00473A8K010 SNX5-217ENST00000606557 1087 ntBASIC18.28■□□□□ 0.52
LINC00473A8K010 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00473A8K010 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.28■□□□□ 0.52
LINC00473A8K010 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC00473A8K010 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00473A8K010 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LINC00473A8K010 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00473A8K010 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.27■□□□□ 0.52
LINC00473A8K010 YBX1P4-201ENST00000392794 808 ntBASIC18.27■□□□□ 0.52
LINC00473A8K010 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.27■□□□□ 0.52
LINC00473A8K010 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.27■□□□□ 0.52
LINC00473A8K010 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.27■□□□□ 0.52
LINC00473A8K010 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LINC00473A8K010 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.27■□□□□ 0.51
LINC00473A8K010 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00473A8K010 GUSBP5-202ENST00000510805 1989 ntBASIC18.26■□□□□ 0.51
LINC00473A8K010 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00473A8K010 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00473A8K010 AL353803.4-201ENST00000565882 1934 ntBASIC18.26■□□□□ 0.51
LINC00473A8K010 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
LINC00473A8K010 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LINC00473A8K010 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.26■□□□□ 0.51
LINC00473A8K010 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.26■□□□□ 0.51
LINC00473A8K010 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00473A8K010 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00473A8K010 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00473A8K010 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00473A8K010 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
LINC00473A8K010 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LINC00473A8K010 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00473A8K010 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00473A8K010 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00473A8K010 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms