Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV25A0A0B4J276 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.89■□□□□ 0.29
TRAV25A0A0B4J276 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV25A0A0B4J276 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.89■□□□□ 0.29
TRAV25A0A0B4J276 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.89■□□□□ 0.29
TRAV25A0A0B4J276 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV25A0A0B4J276 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV25A0A0B4J276 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV25A0A0B4J276 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV25A0A0B4J276 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV25A0A0B4J276 ABCB10P4-201ENST00000566803 2184 ntBASIC16.88■□□□□ 0.29
TRAV25A0A0B4J276 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV25A0A0B4J276 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV25A0A0B4J276 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAV25A0A0B4J276 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV25A0A0B4J276 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV25A0A0B4J276 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV25A0A0B4J276 AC144652.1-201ENST00000609974 1624 ntBASIC16.88■□□□□ 0.29
TRAV25A0A0B4J276 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV25A0A0B4J276 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV25A0A0B4J276 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 DUX4L4-201ENST00000566884 1269 ntBASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 AL138724.1-201ENST00000606771 1088 ntBASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 AC009086.3-201ENST00000623486 1008 ntBASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV25A0A0B4J276 LINC01529-204ENST00000636474 1715 ntBASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 AC099791.2-201ENST00000605725 427 ntBASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 SYT6-210ENST00000641643 1587 ntBASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 AC093323.1-202ENST00000635031 2045 ntBASIC16.84■□□□□ 0.29
TRAV25A0A0B4J276 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV25A0A0B4J276 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV25A0A0B4J276 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV25A0A0B4J276 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV25A0A0B4J276 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRAV25A0A0B4J276 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV25A0A0B4J276 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV25A0A0B4J276 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV25A0A0B4J276 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV25A0A0B4J276 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRAV25A0A0B4J276 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV25A0A0B4J276 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV25A0A0B4J276 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV25A0A0B4J276 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV25A0A0B4J276 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV25A0A0B4J276 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV25A0A0B4J276 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV25A0A0B4J276 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV25A0A0B4J276 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms