Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 KRT17P5-201ENST00000332088 839 ntBASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 MIR557-201ENST00000385239 98 ntBASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 AL627231.1-201ENST00000394467 1125 ntBASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 DUTP3-201ENST00000450025 415 ntBASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 AC128714.1-201ENST00000637035 887 ntBASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 BRD7P5-201ENST00000299197 1822 ntBASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.82■□□□□ 0.12
COL4A3BPQ9Y5P4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 HINT2P1-201ENST00000419438 481 ntBASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 FTLP1-201ENST00000449155 526 ntBASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 AC114947.1-202ENST00000514136 344 ntBASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms