Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 AC026320.2-201ENST00000434379 478 ntBASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 RPSAP15-201ENST00000448168 861 ntBASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 NOC2LP1-201ENST00000450578 752 ntBASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 RN7SL181P-201ENST00000462921 277 ntBASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI2Q9Y5P3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 AC006987.1-201ENST00000413610 527 ntBASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 CEP164P1-201ENST00000455142 418 ntBASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 RN7SL8P-201ENST00000461771 266 ntBASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 RN7SL258P-201ENST00000478664 300 ntBASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 RTN3P1-201ENST00000536295 711 ntBASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 AC026803.1-201ENST00000569130 274 ntBASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 AL353770.1-201ENST00000614915 403 ntBASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 KRT18P9-201ENST00000604826 1300 ntBASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 AC111170.3-201ENST00000624282 2464 ntBASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms