Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 AC131212.3-201ENST00000624087 4219 ntBASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 RCC2P1-201ENST00000452257 1476 ntBASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCDHGC4Q9Y5F7 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 MIR645-201ENST00000385283 94 ntBASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 AL807761.2-201ENST00000422849 729 ntBASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 CEP164P1-201ENST00000455142 418 ntBASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 RN7SL769P-201ENST00000469386 295 ntBASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 NDUFB10P1-201ENST00000567319 521 ntBASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 SIGLEC18P-201ENST00000602271 909 ntBASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
PCDHGC4Q9Y5F7 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 AC010327.5-201ENST00000586923 3061 ntBASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 MIR557-201ENST00000385239 98 ntBASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 BX679664.3-201ENST00000414070 555 ntBASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 AC113935.1-201ENST00000471722 555 ntBASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 AC105129.2-201ENST00000559536 390 ntBASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 AL133467.4-201ENST00000602953 725 ntBASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHGC4Q9Y5F7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms