Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.27□□□□□ -0.29
NR4A1P22736 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 STRCP1-201ENST00000509801 5328 ntBASIC13.27□□□□□ -0.29
NR4A1P22736 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.27□□□□□ -0.29
NR4A1P22736 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.27□□□□□ -0.29
NR4A1P22736 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.26□□□□□ -0.29
NR4A1P22736 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NR4A1P22736 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NR4A1P22736 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
NR4A1P22736 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.26□□□□□ -0.29
NR4A1P22736 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.26□□□□□ -0.29
NR4A1P22736 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NR4A1P22736 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
NR4A1P22736 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.26□□□□□ -0.29
NR4A1P22736 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 AL645937.2-201ENST00000396808 931 ntBASIC13.26□□□□□ -0.29
NR4A1P22736 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC13.26□□□□□ -0.29
NR4A1P22736 TMEM14DP-201ENST00000422205 345 ntBASIC13.26□□□□□ -0.29
NR4A1P22736 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.26□□□□□ -0.29
NR4A1P22736 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.26□□□□□ -0.29
NR4A1P22736 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.26□□□□□ -0.29
NR4A1P22736 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.26□□□□□ -0.29
NR4A1P22736 AC068587.3-201ENST00000526613 355 ntBASIC13.26□□□□□ -0.29
NR4A1P22736 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.26□□□□□ -0.29
NR4A1P22736 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.26□□□□□ -0.29
NR4A1P22736 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.26□□□□□ -0.29
NR4A1P22736 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.26□□□□□ -0.29
NR4A1P22736 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 AP005019.2-201ENST00000615104 511 ntBASIC13.26□□□□□ -0.29
NR4A1P22736 AL162274.1-201ENST00000617191 1098 ntBASIC13.26□□□□□ -0.29
NR4A1P22736 AC145098.2-201ENST00000623593 3026 ntBASIC13.26□□□□□ -0.29
NR4A1P22736 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.26□□□□□ -0.29
NR4A1P22736 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NR4A1P22736 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC13.26□□□□□ -0.29
NR4A1P22736 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NR4A1P22736 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NR4A1P22736 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NR4A1P22736 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NR4A1P22736 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 AL445250.1-201ENST00000641671 2259 ntBASIC13.25□□□□□ -0.29
NR4A1P22736 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.25□□□□□ -0.29
NR4A1P22736 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 AC134312.5-201ENST00000568031 1313 ntBASIC13.25□□□□□ -0.29
NR4A1P22736 AC093525.8-201ENST00000624099 1342 ntBASIC13.25□□□□□ -0.29
NR4A1P22736 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NR4A1P22736 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NR4A1P22736 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms