Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA4P06727 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA4P06727 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.24□□□□□ -0.13
APOA4P06727 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA4P06727 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.24□□□□□ -0.13
APOA4P06727 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.24□□□□□ -0.13
APOA4P06727 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.24□□□□□ -0.13
APOA4P06727 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.24□□□□□ -0.13
APOA4P06727 AC124068.2-201ENST00000569473 1109 ntBASIC14.24□□□□□ -0.13
APOA4P06727 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA4P06727 RN7SL163P-201ENST00000583100 276 ntBASIC14.24□□□□□ -0.13
APOA4P06727 CR392039.2-201ENST00000623182 509 ntBASIC14.24□□□□□ -0.13
APOA4P06727 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.24□□□□□ -0.13
APOA4P06727 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
APOA4P06727 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOA4P06727 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 LAP3P2-201ENST00000454686 1454 ntBASIC14.24□□□□□ -0.13
APOA4P06727 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA4P06727 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA4P06727 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOA4P06727 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA4P06727 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APOA4P06727 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 AC004241.5-201ENST00000623870 2448 ntBASIC14.23□□□□□ -0.13
APOA4P06727 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.23□□□□□ -0.13
APOA4P06727 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA4P06727 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.23□□□□□ -0.13
APOA4P06727 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
APOA4P06727 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APOA4P06727 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
APOA4P06727 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
APOA4P06727 KRT18P15-201ENST00000458108 1291 ntBASIC14.23□□□□□ -0.13
APOA4P06727 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.23□□□□□ -0.13
APOA4P06727 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA4P06727 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.23□□□□□ -0.13
APOA4P06727 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.23□□□□□ -0.13
APOA4P06727 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.23□□□□□ -0.13
APOA4P06727 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.23□□□□□ -0.13
APOA4P06727 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APOA4P06727 RN7SL219P-201ENST00000582872 296 ntBASIC14.23□□□□□ -0.13
APOA4P06727 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.23□□□□□ -0.13
APOA4P06727 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
APOA4P06727 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
APOA4P06727 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
APOA4P06727 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA4P06727 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
APOA4P06727 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA4P06727 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
APOA4P06727 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APOA4P06727 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA4P06727 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.22□□□□□ -0.13
APOA4P06727 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
APOA4P06727 CYP4F23P-201ENST00000593402 1579 ntBASIC14.22□□□□□ -0.13
APOA4P06727 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA4P06727 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA4P06727 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms