Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 HLF-202ENST00000430986 1385 ntTSL 2 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 AC023908.3-201ENST00000564211 3047 ntBASIC14.01□□□□□ -0.17
NCDNQ9UBB6 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 JPT2-203ENST00000382711 894 ntTSL 4 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 CTBP2P6-201ENST00000526402 1229 ntBASIC14.01□□□□□ -0.17
NCDNQ9UBB6 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 AL512324.3-201ENST00000619383 882 ntBASIC14.01□□□□□ -0.17
NCDNQ9UBB6 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 MYO15B-237ENST00000642007 4893 ntBASIC14.01□□□□□ -0.17
NCDNQ9UBB6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCDNQ9UBB6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14□□□□□ -0.17
NCDNQ9UBB6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC14□□□□□ -0.17
NCDNQ9UBB6 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14□□□□□ -0.17
NCDNQ9UBB6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NCDNQ9UBB6 AL157823.1-201ENST00000403727 628 ntBASIC14□□□□□ -0.17
NCDNQ9UBB6 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14□□□□□ -0.17
NCDNQ9UBB6 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC14□□□□□ -0.17
NCDNQ9UBB6 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NCDNQ9UBB6 RN7SL351P-201ENST00000469306 248 ntBASIC14□□□□□ -0.17
NCDNQ9UBB6 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14□□□□□ -0.17
NCDNQ9UBB6 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NCDNQ9UBB6 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14□□□□□ -0.17
NCDNQ9UBB6 BAK1P2-201ENST00000532665 631 ntBASIC14□□□□□ -0.17
NCDNQ9UBB6 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14□□□□□ -0.17
NCDNQ9UBB6 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC14□□□□□ -0.17
NCDNQ9UBB6 AC120498.7-201ENST00000562876 330 ntBASIC14□□□□□ -0.17
NCDNQ9UBB6 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC14□□□□□ -0.17
NCDNQ9UBB6 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14□□□□□ -0.17
NCDNQ9UBB6 URAHP-205ENST00000610227 398 ntBASIC14□□□□□ -0.17
NCDNQ9UBB6 AC005274.1-201ENST00000623460 802 ntBASIC14□□□□□ -0.17
NCDNQ9UBB6 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14□□□□□ -0.17
NCDNQ9UBB6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NCDNQ9UBB6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14□□□□□ -0.17
NCDNQ9UBB6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14□□□□□ -0.17
NCDNQ9UBB6 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NCDNQ9UBB6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14□□□□□ -0.17
NCDNQ9UBB6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NCDNQ9UBB6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCDNQ9UBB6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
NCDNQ9UBB6 AC019109.1-201ENST00000401725 1874 ntBASIC13.99□□□□□ -0.17
NCDNQ9UBB6 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NCDNQ9UBB6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.99□□□□□ -0.17
NCDNQ9UBB6 AC138761.6-201ENST00000583997 1423 ntBASIC13.99□□□□□ -0.17
NCDNQ9UBB6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.99□□□□□ -0.17
NCDNQ9UBB6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NCDNQ9UBB6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NCDNQ9UBB6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms