Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.22□□□□□ -0.13
AP1S1P61966 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.22□□□□□ -0.13
AP1S1P61966 AC019193.1-201ENST00000506678 823 ntBASIC14.22□□□□□ -0.13
AP1S1P61966 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S1P61966 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.22□□□□□ -0.13
AP1S1P61966 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.22□□□□□ -0.13
AP1S1P61966 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.22□□□□□ -0.13
AP1S1P61966 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
AP1S1P61966 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.22□□□□□ -0.13
AP1S1P61966 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
AP1S1P61966 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AP1S1P61966 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.22□□□□□ -0.13
AP1S1P61966 KRT8P18-201ENST00000413425 1445 ntBASIC14.22□□□□□ -0.13
AP1S1P61966 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S1P61966 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
AP1S1P61966 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S1P61966 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
AP1S1P61966 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AP1S1P61966 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S1P61966 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.21□□□□□ -0.13
AP1S1P61966 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.21□□□□□ -0.13
AP1S1P61966 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.21□□□□□ -0.13
AP1S1P61966 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.21□□□□□ -0.13
AP1S1P61966 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
AP1S1P61966 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.21□□□□□ -0.13
AP1S1P61966 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.21□□□□□ -0.13
AP1S1P61966 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.21□□□□□ -0.13
AP1S1P61966 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.21□□□□□ -0.13
AP1S1P61966 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
AP1S1P61966 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.21□□□□□ -0.13
AP1S1P61966 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 KLF17P1-201ENST00000547105 1126 ntBASIC14.21□□□□□ -0.13
AP1S1P61966 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.21□□□□□ -0.13
AP1S1P61966 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
AP1S1P61966 AL139424.3-202ENST00000641619 917 ntBASIC14.21□□□□□ -0.13
AP1S1P61966 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
AP1S1P61966 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
AP1S1P61966 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
AP1S1P61966 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.21□□□□□ -0.13
AP1S1P61966 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP1S1P61966 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
AP1S1P61966 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
AP1S1P61966 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
AP1S1P61966 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.21□□□□□ -0.14
AP1S1P61966 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
AP1S1P61966 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
AP1S1P61966 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.2□□□□□ -0.14
AP1S1P61966 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.2□□□□□ -0.14
AP1S1P61966 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
AP1S1P61966 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.2□□□□□ -0.14
AP1S1P61966 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 AGAP10P-201ENST00000454844 2418 ntBASIC14.2□□□□□ -0.14
AP1S1P61966 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP1S1P61966 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms