Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
UBE2AP49459 AC011700.1-201ENST00000610409 2627 ntBASIC9.09□□□□□ -0.95
UBE2AP49459 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
UBE2AP49459 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
UBE2AP49459 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
UBE2AP49459 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
UBE2AP49459 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
UBE2AP49459 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
UBE2AP49459 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC9.09□□□□□ -0.95
UBE2AP49459 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
UBE2AP49459 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC9.09□□□□□ -0.95
UBE2AP49459 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
UBE2AP49459 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
UBE2AP49459 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
UBE2AP49459 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
UBE2AP49459 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 ADK-205ENST00000539909 1866 ntTSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC9.08□□□□□ -0.96
UBE2AP49459 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC9.08□□□□□ -0.96
UBE2AP49459 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC9.08□□□□□ -0.96
UBE2AP49459 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
UBE2AP49459 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 PDCD6IP-206ENST00000457054 5962 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 CU639417.3-201ENST00000624240 1404 ntBASIC9.08□□□□□ -0.96
UBE2AP49459 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC9.08□□□□□ -0.96
UBE2AP49459 MBLAC2-202ENST00000514906 1936 ntBASIC9.08□□□□□ -0.96
UBE2AP49459 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
UBE2AP49459 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
UBE2AP49459 SNX21-203ENST00000372541 771 ntTSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC9.08□□□□□ -0.96
UBE2AP49459 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC9.08□□□□□ -0.96
UBE2AP49459 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 AL391280.1-201ENST00000506969 1062 ntBASIC9.08□□□□□ -0.96
UBE2AP49459 COX5BP1-201ENST00000507622 393 ntBASIC9.08□□□□□ -0.96
UBE2AP49459 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC9.08□□□□□ -0.96
UBE2AP49459 AHRR-211ENST00000515206 462 ntTSL 5 BASIC9.08□□□□□ -0.96
UBE2AP49459 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC9.08□□□□□ -0.96
UBE2AP49459 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
UBE2AP49459 RPL8-205ENST00000527914 551 ntTSL 3 BASIC9.08□□□□□ -0.96
UBE2AP49459 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
UBE2AP49459 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 SORD2P-201ENST00000558556 1069 ntBASIC9.08□□□□□ -0.96
UBE2AP49459 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC9.08□□□□□ -0.96
UBE2AP49459 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 AC106820.3-201ENST00000561653 397 ntBASIC9.08□□□□□ -0.96
UBE2AP49459 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC9.08□□□□□ -0.96
UBE2AP49459 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
UBE2AP49459 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC9.08□□□□□ -0.96
UBE2AP49459 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
UBE2AP49459 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC9.08□□□□□ -0.96
UBE2AP49459 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
UBE2AP49459 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 BTNL10-201ENST00000595971 695 ntBASIC9.08□□□□□ -0.96
UBE2AP49459 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
UBE2AP49459 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC9.08□□□□□ -0.96
UBE2AP49459 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
UBE2AP49459 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
UBE2AP49459 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
UBE2AP49459 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms