Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.21■□□□□ 0.35
PDE6BP35913 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.21■□□□□ 0.35
PDE6BP35913 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PDE6BP35913 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PDE6BP35913 AIG1-203ENST00000367596 559 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6BP35913 GGTLC4P-201ENST00000402176 664 ntBASIC17.21■□□□□ 0.35
PDE6BP35913 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6BP35913 AC079250.1-201ENST00000456046 531 ntBASIC17.21■□□□□ 0.35
PDE6BP35913 TPT1P11-201ENST00000458482 498 ntBASIC17.21■□□□□ 0.35
PDE6BP35913 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6BP35913 HNRNPA3P6-201ENST00000472163 1006 ntBASIC17.21■□□□□ 0.35
PDE6BP35913 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6BP35913 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC17.21■□□□□ 0.35
PDE6BP35913 KRT8P34-201ENST00000577607 1044 ntBASIC17.21■□□□□ 0.35
PDE6BP35913 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC17.21■□□□□ 0.35
PDE6BP35913 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6BP35913 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC17.21■□□□□ 0.35
PDE6BP35913 MEP1AP1-201ENST00000636082 1097 ntBASIC17.21■□□□□ 0.35
PDE6BP35913 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC17.21■□□□□ 0.35
PDE6BP35913 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PDE6BP35913 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
PDE6BP35913 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6BP35913 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6BP35913 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PDE6BP35913 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PDE6BP35913 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PDE6BP35913 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 MTHFR-210ENST00000641407 2387 ntBASIC17.2■□□□□ 0.34
PDE6BP35913 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 OR7E155P-201ENST00000412208 1014 ntBASIC17.2■□□□□ 0.34
PDE6BP35913 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17.2■□□□□ 0.34
PDE6BP35913 AC041040.1-201ENST00000425197 460 ntBASIC17.2■□□□□ 0.34
PDE6BP35913 RPSAP70-201ENST00000504462 864 ntBASIC17.2■□□□□ 0.34
PDE6BP35913 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC17.2■□□□□ 0.34
PDE6BP35913 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC17.2■□□□□ 0.34
PDE6BP35913 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC17.2■□□□□ 0.34
PDE6BP35913 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC17.2■□□□□ 0.34
PDE6BP35913 AL357143.1-203ENST00000639750 881 ntBASIC17.2■□□□□ 0.34
PDE6BP35913 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.2■□□□□ 0.34
PDE6BP35913 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PDE6BP35913 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.2■□□□□ 0.34
PDE6BP35913 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.2■□□□□ 0.34
PDE6BP35913 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.2■□□□□ 0.34
PDE6BP35913 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PDE6BP35913 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC17.2■□□□□ 0.34
PDE6BP35913 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6BP35913 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PDE6BP35913 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 AC090505.1-201ENST00000430515 1834 ntBASIC17.19■□□□□ 0.34
PDE6BP35913 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.19■□□□□ 0.34
PDE6BP35913 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 RNA5SP491-201ENST00000362936 118 ntBASIC17.19■□□□□ 0.34
PDE6BP35913 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC17.19■□□□□ 0.34
PDE6BP35913 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PDE6BP35913 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC17.19■□□□□ 0.34
PDE6BP35913 RPL18AP16-201ENST00000424057 531 ntBASIC17.19■□□□□ 0.34
PDE6BP35913 AC005722.1-201ENST00000431878 964 ntBASIC17.19■□□□□ 0.34
PDE6BP35913 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms