Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
KRT2P35908 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT2P35908 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT2P35908 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT2P35908 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 KRT17P5-201ENST00000332088 839 ntBASIC16.22■□□□□ 0.19
KRT2P35908 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 AC006987.1-201ENST00000413610 527 ntBASIC16.22■□□□□ 0.19
KRT2P35908 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT2P35908 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT2P35908 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT2P35908 AC005740.1-201ENST00000515639 522 ntBASIC16.22■□□□□ 0.19
KRT2P35908 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.22■□□□□ 0.19
KRT2P35908 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.22■□□□□ 0.19
KRT2P35908 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT2P35908 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT2P35908 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT2P35908 RN7SL455P-201ENST00000580629 282 ntBASIC16.22■□□□□ 0.19
KRT2P35908 AC244093.1-201ENST00000610837 814 ntBASIC16.22■□□□□ 0.19
KRT2P35908 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT2P35908 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT2P35908 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
KRT2P35908 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
KRT2P35908 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT2P35908 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 MARK2P9-201ENST00000430958 1727 ntBASIC16.22■□□□□ 0.19
KRT2P35908 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT2P35908 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT2P35908 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT2P35908 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT2P35908 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
KRT2P35908 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KRT2P35908 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KRT2P35908 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT2P35908 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KRT2P35908 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT2P35908 AC073548.1-201ENST00000624088 1882 ntBASIC16.21■□□□□ 0.19
KRT2P35908 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KRT2P35908 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT2P35908 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT2P35908 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KRT2P35908 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT2P35908 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KRT2P35908 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT2P35908 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT2P35908 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT2P35908 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT2P35908 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT2P35908 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT2P35908 GPR182-203ENST00000622922 591 ntBASIC16.21■□□□□ 0.19
KRT2P35908 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
KRT2P35908 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
KRT2P35908 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT2P35908 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT2P35908 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT2P35908 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
KRT2P35908 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.21■□□□□ 0.18
KRT2P35908 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.21■□□□□ 0.18
KRT2P35908 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.21■□□□□ 0.18
KRT2P35908 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
KRT2P35908 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
KRT2P35908 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
KRT2P35908 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms