Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.96□□□□□ -0.33
HTR1AP08908 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.96□□□□□ -0.33
HTR1AP08908 KRT18P25-201ENST00000508931 1278 ntBASIC12.96□□□□□ -0.33
HTR1AP08908 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.96□□□□□ -0.33
HTR1AP08908 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.96□□□□□ -0.33
HTR1AP08908 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.96□□□□□ -0.33
HTR1AP08908 AL359711.2-201ENST00000563105 872 ntBASIC12.96□□□□□ -0.33
HTR1AP08908 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.96□□□□□ -0.33
HTR1AP08908 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
HTR1AP08908 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HTR1AP08908 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HTR1AP08908 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
HTR1AP08908 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HTR1AP08908 AOC4P-203ENST00000566825 2289 ntBASIC12.96□□□□□ -0.34
HTR1AP08908 AC018445.4-201ENST00000624066 2291 ntBASIC12.96□□□□□ -0.34
HTR1AP08908 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HTR1AP08908 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HTR1AP08908 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HTR1AP08908 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.96□□□□□ -0.34
HTR1AP08908 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HTR1AP08908 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.96□□□□□ -0.34
HTR1AP08908 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.96□□□□□ -0.34
HTR1AP08908 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
HTR1AP08908 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HTR1AP08908 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HTR1AP08908 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
HTR1AP08908 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HTR1AP08908 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.95□□□□□ -0.34
HTR1AP08908 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
HTR1AP08908 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
HTR1AP08908 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
HTR1AP08908 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 PUDPP3-201ENST00000445368 636 ntBASIC12.95□□□□□ -0.34
HTR1AP08908 ALG3P1-201ENST00000508806 1114 ntBASIC12.95□□□□□ -0.34
HTR1AP08908 AC093004.1-201ENST00000508850 424 ntBASIC12.95□□□□□ -0.34
HTR1AP08908 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.95□□□□□ -0.34
HTR1AP08908 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.95□□□□□ -0.34
HTR1AP08908 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.95□□□□□ -0.34
HTR1AP08908 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 AL031432.4-201ENST00000641729 2190 ntBASIC12.95□□□□□ -0.34
HTR1AP08908 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.95□□□□□ -0.34
HTR1AP08908 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.95□□□□□ -0.34
HTR1AP08908 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
HTR1AP08908 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
HTR1AP08908 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HTR1AP08908 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.95□□□□□ -0.34
HTR1AP08908 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
HTR1AP08908 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HTR1AP08908 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
HTR1AP08908 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
HTR1AP08908 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HTR1AP08908 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HTR1AP08908 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HTR1AP08908 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms