Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
APPP05067 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.06■□□□□ 0.32
APPP05067 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.06■□□□□ 0.32
APPP05067 AC007274.2-201ENST00000421675 662 ntBASIC17.06■□□□□ 0.32
APPP05067 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.06■□□□□ 0.32
APPP05067 RPSAP15-201ENST00000448168 861 ntBASIC17.06■□□□□ 0.32
APPP05067 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.06■□□□□ 0.32
APPP05067 IGLV3-15-201ENST00000518356 244 ntBASIC17.06■□□□□ 0.32
APPP05067 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 KRT8P1-201ENST00000557533 1207 ntBASIC17.06■□□□□ 0.32
APPP05067 AC242376.1-201ENST00000559033 726 ntBASIC17.06■□□□□ 0.32
APPP05067 MIR4754-201ENST00000582477 89 ntBASIC17.06■□□□□ 0.32
APPP05067 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.06■□□□□ 0.32
APPP05067 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.06■□□□□ 0.32
APPP05067 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.06■□□□□ 0.32
APPP05067 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC17.06■□□□□ 0.32
APPP05067 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
APPP05067 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC17.06■□□□□ 0.32
APPP05067 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 AC007952.5-201ENST00000572818 1486 ntBASIC17.05■□□□□ 0.32
APPP05067 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.05■□□□□ 0.32
APPP05067 MST1P2-201ENST00000457982 2291 ntBASIC17.05■□□□□ 0.32
APPP05067 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC17.05■□□□□ 0.32
APPP05067 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
APPP05067 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.05■□□□□ 0.32
APPP05067 TBC1D3J-201ENST00000620719 1426 ntBASIC17.05■□□□□ 0.32
APPP05067 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
APPP05067 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
APPP05067 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.05■□□□□ 0.32
APPP05067 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC17.05■□□□□ 0.32
APPP05067 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
APPP05067 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.05■□□□□ 0.32
APPP05067 OR2K2-202ENST00000374428 1038 ntBASIC17.05■□□□□ 0.32
APPP05067 OR8T1P-201ENST00000421347 918 ntBASIC17.05■□□□□ 0.32
APPP05067 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.05■□□□□ 0.32
APPP05067 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.05■□□□□ 0.32
APPP05067 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.05■□□□□ 0.32
APPP05067 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.05■□□□□ 0.32
APPP05067 RN7SL258P-201ENST00000478664 300 ntBASIC17.05■□□□□ 0.32
APPP05067 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.05■□□□□ 0.32
APPP05067 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.05■□□□□ 0.32
APPP05067 AC134698.3-201ENST00000523880 214 ntBASIC17.05■□□□□ 0.32
APPP05067 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.05■□□□□ 0.32
APPP05067 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.05■□□□□ 0.32
APPP05067 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.05■□□□□ 0.32
APPP05067 PHBP15-201ENST00000574228 665 ntBASIC17.05■□□□□ 0.32
APPP05067 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.05■□□□□ 0.32
APPP05067 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.05■□□□□ 0.32
APPP05067 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.05■□□□□ 0.32
APPP05067 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.05■□□□□ 0.32
APPP05067 AC007718.1-201ENST00000621078 280 ntBASIC17.05■□□□□ 0.32
APPP05067 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.05■□□□□ 0.32
APPP05067 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.05■□□□□ 0.32
APPP05067 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.05■□□□□ 0.32
APPP05067 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 TCAM1P-207ENST00000485295 1537 ntBASIC17.05■□□□□ 0.32
APPP05067 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
APPP05067 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
APPP05067 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
APPP05067 FAM90A2P-201ENST00000511144 1395 ntBASIC17.04■□□□□ 0.32
APPP05067 FAM90A25P-201ENST00000528404 1395 ntBASIC17.04■□□□□ 0.32
APPP05067 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC17.04■□□□□ 0.32
APPP05067 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
APPP05067 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms