Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
KNCNA6PVL3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
KNCNA6PVL3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
KNCNA6PVL3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
KNCNA6PVL3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
KNCNA6PVL3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KNCNA6PVL3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC10.69□□□□□ -0.7
KNCNA6PVL3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
KNCNA6PVL3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC10.69□□□□□ -0.7
KNCNA6PVL3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KNCNA6PVL3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KNCNA6PVL3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC10.69□□□□□ -0.7
KNCNA6PVL3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC10.69□□□□□ -0.7
KNCNA6PVL3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KNCNA6PVL3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KNCNA6PVL3 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KNCNA6PVL3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KNCNA6PVL3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KNCNA6PVL3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
KNCNA6PVL3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KNCNA6PVL3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KNCNA6PVL3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 AHCYP4-201ENST00000419201 1315 ntBASIC10.68□□□□□ -0.7
KNCNA6PVL3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 EIF4HP1-201ENST00000453115 687 ntBASIC10.68□□□□□ -0.7
KNCNA6PVL3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 SNORD3B-2-202ENST00000571722 791 ntBASIC10.68□□□□□ -0.7
KNCNA6PVL3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 CCT8L1P-201ENST00000465400 1674 ntBASIC10.68□□□□□ -0.7
KNCNA6PVL3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 AC090643.2-201ENST00000623442 2029 ntBASIC10.68□□□□□ -0.7
KNCNA6PVL3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC10.68□□□□□ -0.7
KNCNA6PVL3 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KNCNA6PVL3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC10.67□□□□□ -0.7
KNCNA6PVL3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC10.67□□□□□ -0.7
KNCNA6PVL3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC10.67□□□□□ -0.7
KNCNA6PVL3 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms