Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 AC005357.2-202ENST00000590507 1060 ntBASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 LINC01783-202ENST00000614408 828 ntBASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 BX284668.2-205ENST00000619677 828 ntBASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 RPL13AP3-202ENST00000494676 1473 ntBASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.36□□□□□ -0.11
RAI2Q9Y5P3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 ALG1L13P-202ENST00000519320 584 ntBASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 AL109837.1-201ENST00000603272 613 ntBASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 AC009084.3-201ENST00000623356 437 ntBASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI2Q9Y5P3 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAI2Q9Y5P3 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms