Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 COQ10BP2-201ENST00000513804 724 ntBASIC18.31■□□□□ 0.52
CCDC27Q2M243 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 MIR4265-201ENST00000582152 99 ntBASIC18.31■□□□□ 0.52
CCDC27Q2M243 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 AL133499.1-201ENST00000596207 608 ntBASIC18.31■□□□□ 0.52
CCDC27Q2M243 SIGLEC22P-201ENST00000599104 714 ntBASIC18.31■□□□□ 0.52
CCDC27Q2M243 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC27Q2M243 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 TNN-203ENST00000622870 3719 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 AC006372.4-201ENST00000624122 1543 ntBASIC18.3■□□□□ 0.52
CCDC27Q2M243 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 SAT1-201ENST00000379251 801 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 SAT1-202ENST00000379253 909 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 SAT1-203ENST00000379254 868 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 AL512306.1-201ENST00000432698 848 ntBASIC18.3■□□□□ 0.52
CCDC27Q2M243 EEF1DP2-201ENST00000433698 843 ntBASIC18.3■□□□□ 0.52
CCDC27Q2M243 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 AC134698.3-201ENST00000523880 214 ntBASIC18.3■□□□□ 0.52
CCDC27Q2M243 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 AC105129.2-201ENST00000559536 390 ntBASIC18.3■□□□□ 0.52
CCDC27Q2M243 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 AL356740.1-201ENST00000602192 1297 ntBASIC18.3■□□□□ 0.52
CCDC27Q2M243 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC27Q2M243 GOLGA8UP-201ENST00000527159 1755 ntBASIC18.3■□□□□ 0.52
CCDC27Q2M243 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC27Q2M243 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 TEKT4P2-202ENST00000559466 1312 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms