Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 AC099521.3-201ENST00000624251 2938 ntBASIC16.32■□□□□ 0.2
CHMP4BP1P59074 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 AL512430.1-201ENST00000392575 860 ntBASIC16.32■□□□□ 0.2
CHMP4BP1P59074 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 AL592076.1-201ENST00000424448 303 ntBASIC16.32■□□□□ 0.2
CHMP4BP1P59074 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 AC098935.1-201ENST00000446057 611 ntBASIC16.32■□□□□ 0.2
CHMP4BP1P59074 AC104784.1-201ENST00000473096 294 ntBASIC16.32■□□□□ 0.2
CHMP4BP1P59074 ALG3P1-201ENST00000508806 1114 ntBASIC16.32■□□□□ 0.2
CHMP4BP1P59074 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 MRPL37P1-201ENST00000592451 1337 ntBASIC16.32■□□□□ 0.2
CHMP4BP1P59074 AC092171.5-201ENST00000608012 942 ntBASIC16.32■□□□□ 0.2
CHMP4BP1P59074 AC074138.1-201ENST00000611182 1303 ntBASIC16.32■□□□□ 0.2
CHMP4BP1P59074 MEG3_2.1-201ENST00000611456 105 ntBASIC16.32■□□□□ 0.2
CHMP4BP1P59074 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 AC011491.1-203ENST00000637688 543 ntBASIC16.32■□□□□ 0.2
CHMP4BP1P59074 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP4BP1P59074 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 LINC01165-201ENST00000445190 1623 ntBASIC16.31■□□□□ 0.2
CHMP4BP1P59074 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 RN7SL8P-201ENST00000461771 266 ntBASIC16.31■□□□□ 0.2
CHMP4BP1P59074 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 AC087045.2-201ENST00000606279 1003 ntBASIC16.31■□□□□ 0.2
CHMP4BP1P59074 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP4BP1P59074 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.3■□□□□ 0.2
CHMP4BP1P59074 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP4BP1P59074 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP4BP1P59074 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP4BP1P59074 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHMP4BP1P59074 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP4BP1P59074 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP4BP1P59074 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHMP4BP1P59074 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms