Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.69□□□□□ -0.54
NKX2-1P43699 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-1P43699 CLUHP2-201ENST00000426660 1303 ntBASIC11.69□□□□□ -0.54
NKX2-1P43699 FKBP4P6-201ENST00000457486 1332 ntBASIC11.69□□□□□ -0.54
NKX2-1P43699 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-1P43699 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-1P43699 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
NKX2-1P43699 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
NKX2-1P43699 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.69□□□□□ -0.54
NKX2-1P43699 TREML5P-201ENST00000421694 576 ntBASIC11.69□□□□□ -0.54
NKX2-1P43699 MEP1AP4-201ENST00000423244 1087 ntBASIC11.69□□□□□ -0.54
NKX2-1P43699 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-1P43699 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.69□□□□□ -0.54
NKX2-1P43699 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-1P43699 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-1P43699 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-1P43699 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.69□□□□□ -0.54
NKX2-1P43699 AC009407.1-201ENST00000568958 598 ntBASIC11.69□□□□□ -0.54
NKX2-1P43699 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.69□□□□□ -0.54
NKX2-1P43699 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-1P43699 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
NKX2-1P43699 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
NKX2-1P43699 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-1P43699 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
NKX2-1P43699 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-1P43699 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-1P43699 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
NKX2-1P43699 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-1P43699 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
NKX2-1P43699 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-1P43699 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-1P43699 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 GHET1-201ENST00000627071 1906 ntBASIC11.68□□□□□ -0.54
NKX2-1P43699 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.68□□□□□ -0.54
NKX2-1P43699 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
NKX2-1P43699 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NKX2-1P43699 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
NKX2-1P43699 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
NKX2-1P43699 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
NKX2-1P43699 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.68□□□□□ -0.54
NKX2-1P43699 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.68□□□□□ -0.54
NKX2-1P43699 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.68□□□□□ -0.54
NKX2-1P43699 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.68□□□□□ -0.54
NKX2-1P43699 AC245100.3-201ENST00000441281 285 ntBASIC11.68□□□□□ -0.54
NKX2-1P43699 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.68□□□□□ -0.54
NKX2-1P43699 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.68□□□□□ -0.54
NKX2-1P43699 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.68□□□□□ -0.54
NKX2-1P43699 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.68□□□□□ -0.54
NKX2-1P43699 AC023310.3-201ENST00000557027 670 ntBASIC11.68□□□□□ -0.54
NKX2-1P43699 AC100756.1-201ENST00000562736 682 ntBASIC11.68□□□□□ -0.54
NKX2-1P43699 AC138749.3-201ENST00000567691 622 ntBASIC11.68□□□□□ -0.54
NKX2-1P43699 AC124283.3-201ENST00000570869 594 ntBASIC11.68□□□□□ -0.54
NKX2-1P43699 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.68□□□□□ -0.54
NKX2-1P43699 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.68□□□□□ -0.54
NKX2-1P43699 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NKX2-1P43699 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.68□□□□□ -0.54
NKX2-1P43699 AC116165.1-201ENST00000611806 668 ntBASIC11.68□□□□□ -0.54
NKX2-1P43699 AC002472.3-201ENST00000640124 621 ntBASIC11.68□□□□□ -0.54
NKX2-1P43699 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 AC073862.5-201ENST00000624129 2027 ntBASIC11.68□□□□□ -0.54
NKX2-1P43699 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.68□□□□□ -0.54
NKX2-1P43699 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-1P43699 PCDHB19P-202ENST00000625133 2914 ntBASIC11.68□□□□□ -0.54
NKX2-1P43699 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.68□□□□□ -0.54
NKX2-1P43699 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms