Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
CEACAM3P40198 NCR3-202ENST00000376071 541 ntTSL 5 BASIC11.66□□□□□ -0.54
CEACAM3P40198 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
CEACAM3P40198 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC11.66□□□□□ -0.54
CEACAM3P40198 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 PACS1-203ENST00000524815 628 ntTSL 4 BASIC11.66□□□□□ -0.54
CEACAM3P40198 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC11.66□□□□□ -0.54
CEACAM3P40198 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 KC6-205ENST00000599934 556 ntTSL 4 BASIC11.66□□□□□ -0.54
CEACAM3P40198 AL451050.2-201ENST00000606967 682 ntBASIC11.66□□□□□ -0.54
CEACAM3P40198 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
CEACAM3P40198 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC11.66□□□□□ -0.54
CEACAM3P40198 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
CEACAM3P40198 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 AC012617.1-204ENST00000586340 2305 ntBASIC11.66□□□□□ -0.54
CEACAM3P40198 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
CEACAM3P40198 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.66□□□□□ -0.54
CEACAM3P40198 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CEACAM3P40198 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.66□□□□□ -0.54
CEACAM3P40198 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CEACAM3P40198 CCT8L1P-201ENST00000465400 1674 ntBASIC11.65□□□□□ -0.54
CEACAM3P40198 AL157791.1-201ENST00000553667 1699 ntBASIC11.65□□□□□ -0.54
CEACAM3P40198 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
CEACAM3P40198 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 KRT8P21-201ENST00000430398 1491 ntBASIC11.65□□□□□ -0.54
CEACAM3P40198 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.65□□□□□ -0.54
CEACAM3P40198 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
CEACAM3P40198 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.65□□□□□ -0.54
CEACAM3P40198 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
CEACAM3P40198 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 AGER-203ENST00000375065 665 ntTSL 2 BASIC11.65□□□□□ -0.54
CEACAM3P40198 MIR769-201ENST00000390225 118 ntBASIC11.65□□□□□ -0.54
CEACAM3P40198 HNRNPA1P41-201ENST00000397777 928 ntBASIC11.65□□□□□ -0.54
CEACAM3P40198 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 MIR1247-201ENST00000408206 136 ntBASIC11.65□□□□□ -0.54
CEACAM3P40198 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC11.65□□□□□ -0.54
CEACAM3P40198 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC11.65□□□□□ -0.54
CEACAM3P40198 GPAA1P2-201ENST00000417923 928 ntBASIC11.65□□□□□ -0.54
CEACAM3P40198 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC11.65□□□□□ -0.54
CEACAM3P40198 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.65□□□□□ -0.54
CEACAM3P40198 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC11.65□□□□□ -0.54
CEACAM3P40198 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC11.65□□□□□ -0.54
CEACAM3P40198 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC11.65□□□□□ -0.54
CEACAM3P40198 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC11.65□□□□□ -0.54
CEACAM3P40198 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.65□□□□□ -0.54
CEACAM3P40198 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.65□□□□□ -0.54
CEACAM3P40198 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CEACAM3P40198 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 NDUFV2P1-201ENST00000596415 907 ntBASIC11.65□□□□□ -0.54
CEACAM3P40198 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
CEACAM3P40198 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.65□□□□□ -0.54
CEACAM3P40198 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC11.65□□□□□ -0.54
CEACAM3P40198 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CEACAM3P40198 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.65□□□□□ -0.54
CEACAM3P40198 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms