Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC004461.1-201ENST00000412461 403 ntBASIC10.49□□□□□ -0.73
CKS2P33552 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC10.49□□□□□ -0.73
CKS2P33552 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 FAM86LP-201ENST00000478302 853 ntBASIC10.49□□□□□ -0.73
CKS2P33552 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC10.49□□□□□ -0.73
CKS2P33552 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC10.49□□□□□ -0.73
CKS2P33552 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC10.49□□□□□ -0.73
CKS2P33552 AC044860.1-202ENST00000559481 777 ntBASIC10.49□□□□□ -0.73
CKS2P33552 AC027237.1-201ENST00000560942 655 ntBASIC10.49□□□□□ -0.73
CKS2P33552 AC092337.1-201ENST00000568699 1129 ntBASIC10.49□□□□□ -0.73
CKS2P33552 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.49□□□□□ -0.73
CKS2P33552 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC10.49□□□□□ -0.73
CKS2P33552 MTDHP5-201ENST00000598980 586 ntBASIC10.49□□□□□ -0.73
CKS2P33552 CR392039.2-201ENST00000623182 509 ntBASIC10.49□□□□□ -0.73
CKS2P33552 AL513210.1-201ENST00000629608 234 ntBASIC10.49□□□□□ -0.73
CKS2P33552 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CKS2P33552 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CKS2P33552 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CKS2P33552 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
CKS2P33552 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS2P33552 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS2P33552 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 APOA1-205ENST00000375329 927 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 AL590627.1-203ENST00000421194 1026 ntBASIC10.48□□□□□ -0.73
CKS2P33552 AL161932.2-201ENST00000435436 679 ntBASIC10.48□□□□□ -0.73
CKS2P33552 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC10.48□□□□□ -0.73
CKS2P33552 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 VDAC1P7-201ENST00000462417 847 ntBASIC10.48□□□□□ -0.73
CKS2P33552 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC10.48□□□□□ -0.73
CKS2P33552 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC10.48□□□□□ -0.73
CKS2P33552 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC10.48□□□□□ -0.73
CKS2P33552 JPT2-214ENST00000569765 782 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
CKS2P33552 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS2P33552 AP001059.3-201ENST00000619053 235 ntBASIC10.48□□□□□ -0.73
CKS2P33552 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.48□□□□□ -0.73
CKS2P33552 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS2P33552 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS2P33552 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS2P33552 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 PER1-202ENST00000354903 3115 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 AL021155.1-201ENST00000438808 2637 ntBASIC10.48□□□□□ -0.73
CKS2P33552 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS2P33552 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 AC073869.1-201ENST00000415574 2762 ntBASIC10.48□□□□□ -0.73
CKS2P33552 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms