Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.72□□□□□ -0.37
CNOT4O95628 AC007274.2-201ENST00000421675 662 ntBASIC12.72□□□□□ -0.37
CNOT4O95628 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CNOT4O95628 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.72□□□□□ -0.37
CNOT4O95628 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 RN7SL258P-201ENST00000478664 300 ntBASIC12.72□□□□□ -0.37
CNOT4O95628 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 PRKXP1-201ENST00000561423 1122 ntBASIC12.72□□□□□ -0.37
CNOT4O95628 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.72□□□□□ -0.37
CNOT4O95628 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.71□□□□□ -0.37
CNOT4O95628 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CNOT4O95628 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CNOT4O95628 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CNOT4O95628 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.71□□□□□ -0.37
CNOT4O95628 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
CNOT4O95628 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.71□□□□□ -0.37
CNOT4O95628 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
CNOT4O95628 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.71□□□□□ -0.37
CNOT4O95628 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CNOT4O95628 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
CNOT4O95628 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 RPL17P11-201ENST00000417593 544 ntBASIC12.71□□□□□ -0.37
CNOT4O95628 ISCA2P1-201ENST00000425548 448 ntBASIC12.71□□□□□ -0.37
CNOT4O95628 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.71□□□□□ -0.37
CNOT4O95628 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.71□□□□□ -0.37
CNOT4O95628 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.71□□□□□ -0.37
CNOT4O95628 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.71□□□□□ -0.37
CNOT4O95628 AC012618.1-201ENST00000461223 412 ntBASIC12.71□□□□□ -0.37
CNOT4O95628 AC008267.1-201ENST00000474858 1069 ntBASIC12.71□□□□□ -0.37
CNOT4O95628 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.71□□□□□ -0.37
CNOT4O95628 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.71□□□□□ -0.37
CNOT4O95628 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.71□□□□□ -0.37
CNOT4O95628 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.71□□□□□ -0.37
CNOT4O95628 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
CNOT4O95628 RN7SL574P-201ENST00000581512 297 ntBASIC12.71□□□□□ -0.37
CNOT4O95628 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.71□□□□□ -0.37
CNOT4O95628 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
CNOT4O95628 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.71□□□□□ -0.38
CNOT4O95628 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CNOT4O95628 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.71□□□□□ -0.38
CNOT4O95628 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
CNOT4O95628 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
CNOT4O95628 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.71□□□□□ -0.38
CNOT4O95628 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CNOT4O95628 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.71□□□□□ -0.38
CNOT4O95628 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CNOT4O95628 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CNOT4O95628 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CNOT4O95628 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CNOT4O95628 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.71□□□□□ -0.38
CNOT4O95628 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CNOT4O95628 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CNOT4O95628 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CNOT4O95628 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CNOT4O95628 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CNOT4O95628 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms