Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 BTBD6P1-201ENST00000412176 1267 ntBASIC14.46□□□□□ -0.09
CCDC78A2IDD5 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 GOLGA2P4-201ENST00000441462 777 ntBASIC14.46□□□□□ -0.09
CCDC78A2IDD5 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 AC092658.1-201ENST00000505836 891 ntBASIC14.46□□□□□ -0.09
CCDC78A2IDD5 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.46□□□□□ -0.09
CCDC78A2IDD5 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CCDC78A2IDD5 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC78A2IDD5 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.46□□□□□ -0.1
CCDC78A2IDD5 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC78A2IDD5 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC78A2IDD5 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.46□□□□□ -0.1
CCDC78A2IDD5 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC78A2IDD5 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC78A2IDD5 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 PCDHA5-203ENST00000614258 4248 ntBASIC14.45□□□□□ -0.1
CCDC78A2IDD5 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AC005695.3-201ENST00000614522 232 ntBASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AC133540.1-201ENST00000620845 1019 ntBASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AC018629.1-201ENST00000623381 1736 ntBASIC14.45□□□□□ -0.1
CCDC78A2IDD5 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
CCDC78A2IDD5 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 AC015909.5-201ENST00000624336 2266 ntBASIC14.44□□□□□ -0.1
CCDC78A2IDD5 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC78A2IDD5 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.44□□□□□ -0.1
CCDC78A2IDD5 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms