Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 AC025271.4-201ENST00000621477 1726 ntBASIC13.98□□□□□ -0.17
HDAC8Q9BY41 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDAC8Q9BY41 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HDAC8Q9BY41 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HDAC8Q9BY41 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HDAC8Q9BY41 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HDAC8Q9BY41 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 AC073210.1-201ENST00000414799 232 ntBASIC13.97□□□□□ -0.17
HDAC8Q9BY41 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 GNG10P1-201ENST00000452289 199 ntBASIC13.97□□□□□ -0.17
HDAC8Q9BY41 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 AC093300.1-201ENST00000510368 1201 ntBASIC13.97□□□□□ -0.17
HDAC8Q9BY41 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 CR392039.2-201ENST00000623182 509 ntBASIC13.97□□□□□ -0.17
HDAC8Q9BY41 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HDAC8Q9BY41 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.96□□□□□ -0.17
HDAC8Q9BY41 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 AC021305.1-201ENST00000520656 1514 ntBASIC13.96□□□□□ -0.17
HDAC8Q9BY41 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 OR2I1P-210ENST00000642037 4691 ntBASIC13.96□□□□□ -0.17
HDAC8Q9BY41 AL157996.1-201ENST00000624684 2299 ntBASIC13.96□□□□□ -0.17
HDAC8Q9BY41 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 OR7E115P-201ENST00000382617 1024 ntBASIC13.96□□□□□ -0.17
HDAC8Q9BY41 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 DKKL1P1-201ENST00000400550 698 ntBASIC13.96□□□□□ -0.17
HDAC8Q9BY41 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 AC084752.1-201ENST00000509766 622 ntBASIC13.96□□□□□ -0.17
HDAC8Q9BY41 AC100858.1-201ENST00000514059 1228 ntBASIC13.96□□□□□ -0.17
HDAC8Q9BY41 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 VENTXP3-201ENST00000546480 773 ntBASIC13.96□□□□□ -0.17
HDAC8Q9BY41 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 AC126755.1-201ENST00000525846 6405 ntBASIC13.96□□□□□ -0.17
HDAC8Q9BY41 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HDAC8Q9BY41 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HDAC8Q9BY41 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HDAC8Q9BY41 AC117503.4-201ENST00000623229 1418 ntBASIC13.96□□□□□ -0.18
HDAC8Q9BY41 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HDAC8Q9BY41 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HDAC8Q9BY41 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HDAC8Q9BY41 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
HDAC8Q9BY41 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms