Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SRFBP1Q8NEF9 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SRFBP1Q8NEF9 KRT8P21-201ENST00000430398 1491 ntBASIC13.61□□□□□ -0.23
SRFBP1Q8NEF9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SRFBP1Q8NEF9 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 PCDHA5-203ENST00000614258 4248 ntBASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 FAM86MP-201ENST00000340703 885 ntBASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 AL157996.1-201ENST00000624684 2299 ntBASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.6□□□□□ -0.23
SRFBP1Q8NEF9 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 KRT8P13-201ENST00000463294 1010 ntBASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 AC243960.2-201ENST00000600996 747 ntBASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 AL451050.2-201ENST00000606967 682 ntBASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 AC026740.1-201ENST00000607068 791 ntBASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.59□□□□□ -0.23
SRFBP1Q8NEF9 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms