Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PER3P56645 AP000845.1-201ENST00000581677 2131 ntBASIC13.3□□□□□ -0.28
PER3P56645 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.3□□□□□ -0.28
PER3P56645 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PER3P56645 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PER3P56645 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PER3P56645 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PER3P56645 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PER3P56645 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 AC152010.1-201ENST00000415779 2006 ntBASIC13.29□□□□□ -0.28
PER3P56645 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.29□□□□□ -0.28
PER3P56645 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.29□□□□□ -0.28
PER3P56645 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
PER3P56645 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.29□□□□□ -0.28
PER3P56645 RN7SKP175-201ENST00000408472 289 ntBASIC13.29□□□□□ -0.28
PER3P56645 AC078991.1-201ENST00000437297 610 ntBASIC13.29□□□□□ -0.28
PER3P56645 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.29□□□□□ -0.28
PER3P56645 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 SNORD3B-2-202ENST00000571722 791 ntBASIC13.29□□□□□ -0.28
PER3P56645 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.29□□□□□ -0.28
PER3P56645 AC132192.2-201ENST00000596206 1147 ntBASIC13.29□□□□□ -0.28
PER3P56645 AC009955.4-201ENST00000597192 544 ntBASIC13.29□□□□□ -0.28
PER3P56645 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
PER3P56645 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PER3P56645 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 FAM90A2P-201ENST00000511144 1395 ntBASIC13.29□□□□□ -0.28
PER3P56645 FAM90A25P-201ENST00000528404 1395 ntBASIC13.29□□□□□ -0.28
PER3P56645 AC073869.1-201ENST00000415574 2762 ntBASIC13.29□□□□□ -0.28
PER3P56645 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 AC020910.5-201ENST00000623668 1865 ntBASIC13.29□□□□□ -0.28
PER3P56645 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.29□□□□□ -0.28
PER3P56645 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
PER3P56645 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
PER3P56645 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PER3P56645 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PER3P56645 AC011840.2-201ENST00000563063 1520 ntBASIC13.29□□□□□ -0.28
PER3P56645 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PER3P56645 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.28□□□□□ -0.28
PER3P56645 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.28□□□□□ -0.28
PER3P56645 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.28□□□□□ -0.28
PER3P56645 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
PER3P56645 AC239868.1-201ENST00000369385 493 ntBASIC13.28□□□□□ -0.28
PER3P56645 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PER3P56645 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.28□□□□□ -0.28
PER3P56645 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PER3P56645 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.28□□□□□ -0.28
PER3P56645 RN7SL258P-201ENST00000478664 300 ntBASIC13.28□□□□□ -0.28
PER3P56645 AC008723.1-201ENST00000506922 207 ntBASIC13.28□□□□□ -0.28
PER3P56645 AP002803.1-201ENST00000528836 498 ntBASIC13.28□□□□□ -0.28
PER3P56645 AC009779.1-201ENST00000551138 283 ntBASIC13.28□□□□□ -0.28
PER3P56645 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.28□□□□□ -0.28
PER3P56645 AC138696.2-201ENST00000607376 223 ntBASIC13.28□□□□□ -0.28
PER3P56645 AL358472.3-201ENST00000608147 415 ntBASIC13.28□□□□□ -0.28
PER3P56645 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.28□□□□□ -0.28
PER3P56645 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.28□□□□□ -0.28
PER3P56645 AC009084.3-201ENST00000623356 437 ntBASIC13.28□□□□□ -0.28
PER3P56645 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms