Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TUBP50607 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TUBP50607 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBP50607 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TUBP50607 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TUBP50607 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBP50607 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.02■□□□□ -0
TUBP50607 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBP50607 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.02■□□□□ -0
TUBP50607 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TUBP50607 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TUBP50607 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.02■□□□□ -0
TUBP50607 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBP50607 AC012617.1-204ENST00000586340 2305 ntBASIC15.02■□□□□ -0
TUBP50607 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBP50607 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBP50607 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TUBP50607 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.02■□□□□ -0
TUBP50607 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBP50607 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBP50607 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBP50607 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.02■□□□□ -0
TUBP50607 EEF1DP6-201ENST00000449232 372 ntBASIC15.02■□□□□ -0
TUBP50607 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.02■□□□□ -0
TUBP50607 DUX4L50-201ENST00000455245 715 ntBASIC15.02■□□□□ -0
TUBP50607 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.02■□□□□ -0
TUBP50607 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.02■□□□□ -0
TUBP50607 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.02■□□□□ -0
TUBP50607 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.02■□□□□ -0
TUBP50607 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBP50607 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TUBP50607 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TUBP50607 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.02■□□□□ -0
TUBP50607 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.02■□□□□ -0
TUBP50607 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.02■□□□□ -0
TUBP50607 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.02■□□□□ -0
TUBP50607 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBP50607 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBP50607 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TUBP50607 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.02□□□□□ -0.01
TUBP50607 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.02□□□□□ -0.01
TUBP50607 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TUBP50607 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBP50607 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TUBP50607 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.02□□□□□ -0.01
TUBP50607 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TUBP50607 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TUBP50607 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TUBP50607 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.02□□□□□ -0.01
TUBP50607 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 KRT8P31-201ENST00000504812 1408 ntBASIC15.01□□□□□ -0.01
TUBP50607 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TUBP50607 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBP50607 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBP50607 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBP50607 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TUBP50607 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 KRT18P9-201ENST00000604826 1300 ntBASIC15.01□□□□□ -0.01
TUBP50607 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBP50607 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBP50607 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBP50607 RPSAP15-201ENST00000448168 861 ntBASIC15.01□□□□□ -0.01
TUBP50607 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 AC019193.1-201ENST00000506678 823 ntBASIC15.01□□□□□ -0.01
TUBP50607 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.01□□□□□ -0.01
TUBP50607 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBP50607 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TUBP50607 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.01□□□□□ -0.01
TUBP50607 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TUBP50607 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBP50607 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBP50607 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBP50607 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBP50607 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TUBP50607 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15□□□□□ -0.01
TUBP50607 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TUBP50607 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
TUBP50607 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15□□□□□ -0.01
TUBP50607 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TUBP50607 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15□□□□□ -0.01
TUBP50607 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms