Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGCLP35914 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGCLP35914 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGCLP35914 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGCLP35914 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGCLP35914 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 AL133467.4-201ENST00000602953 725 ntBASIC14.1□□□□□ -0.15
HMGCLP35914 AL021707.6-201ENST00000609212 491 ntBASIC14.1□□□□□ -0.15
HMGCLP35914 AF254983.2-201ENST00000612331 135 ntBASIC14.1□□□□□ -0.15
HMGCLP35914 AC091812.3-201ENST00000621362 345 ntBASIC14.1□□□□□ -0.15
HMGCLP35914 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGCLP35914 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
HMGCLP35914 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.1□□□□□ -0.15
HMGCLP35914 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
HMGCLP35914 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HMGCLP35914 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCLP35914 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HMGCLP35914 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
HMGCLP35914 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 MIR645-201ENST00000385283 94 ntBASIC14.09□□□□□ -0.15
HMGCLP35914 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGCLP35914 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGCLP35914 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
HMGCLP35914 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGCLP35914 SLC25A15P3-201ENST00000505530 290 ntBASIC14.09□□□□□ -0.15
HMGCLP35914 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 RTN3P1-201ENST00000536295 711 ntBASIC14.09□□□□□ -0.15
HMGCLP35914 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
HMGCLP35914 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCLP35914 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCLP35914 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCLP35914 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 AC130686.1-201ENST00000622936 2466 ntBASIC14.09□□□□□ -0.15
HMGCLP35914 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
HMGCLP35914 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGCLP35914 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCLP35914 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCLP35914 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.08□□□□□ -0.15
HMGCLP35914 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCLP35914 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCLP35914 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCLP35914 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCLP35914 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCLP35914 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCLP35914 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.08□□□□□ -0.15
HMGCLP35914 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
HMGCLP35914 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCLP35914 AL591122.2-201ENST00000624125 1853 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms