Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.23□□□□□ -0.29
LCN1P31025 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LCN1P31025 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LCN1P31025 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LCN1P31025 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LCN1P31025 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LCN1P31025 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LCN1P31025 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LCN1P31025 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LCN1P31025 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.23□□□□□ -0.29
LCN1P31025 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LCN1P31025 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LCN1P31025 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.23□□□□□ -0.29
LCN1P31025 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LCN1P31025 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.23□□□□□ -0.29
LCN1P31025 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LCN1P31025 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LCN1P31025 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LCN1P31025 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LCN1P31025 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LCN1P31025 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LCN1P31025 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
LCN1P31025 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LCN1P31025 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.22□□□□□ -0.29
LCN1P31025 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 MIR1908-201ENST00000410394 80 ntBASIC13.22□□□□□ -0.29
LCN1P31025 HMGA1P1-201ENST00000415560 1062 ntBASIC13.22□□□□□ -0.29
LCN1P31025 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.22□□□□□ -0.29
LCN1P31025 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.22□□□□□ -0.29
LCN1P31025 ACTBP11-201ENST00000436287 1126 ntBASIC13.22□□□□□ -0.29
LCN1P31025 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.22□□□□□ -0.29
LCN1P31025 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.22□□□□□ -0.29
LCN1P31025 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.22□□□□□ -0.29
LCN1P31025 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 AL022328.3-201ENST00000607943 679 ntBASIC13.22□□□□□ -0.29
LCN1P31025 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
LCN1P31025 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.22□□□□□ -0.29
LCN1P31025 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.22□□□□□ -0.29
LCN1P31025 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.22□□□□□ -0.29
LCN1P31025 AC092053.3-201ENST00000641308 4975 ntBASIC13.22□□□□□ -0.29
LCN1P31025 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 AL139385.1-201ENST00000611744 3272 ntBASIC13.22□□□□□ -0.29
LCN1P31025 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.22□□□□□ -0.29
LCN1P31025 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LCN1P31025 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LCN1P31025 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LCN1P31025 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LCN1P31025 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LCN1P31025 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LCN1P31025 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LCN1P31025 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.21□□□□□ -0.29
LCN1P31025 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LCN1P31025 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.21□□□□□ -0.29
LCN1P31025 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LCN1P31025 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.21□□□□□ -0.29
LCN1P31025 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.21□□□□□ -0.29
LCN1P31025 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LCN1P31025 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LCN1P31025 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.21□□□□□ -0.29
LCN1P31025 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LCN1P31025 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LCN1P31025 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LCN1P31025 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.21□□□□□ -0.29
LCN1P31025 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LCN1P31025 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms