Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
RAB4AP20338 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
RAB4AP20338 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
RAB4AP20338 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC10.96□□□□□ -0.65
RAB4AP20338 AC003958.1-201ENST00000435883 421 ntBASIC10.96□□□□□ -0.65
RAB4AP20338 SPDYE11-202ENST00000450699 704 ntBASIC10.96□□□□□ -0.65
RAB4AP20338 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC10.96□□□□□ -0.65
RAB4AP20338 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.96□□□□□ -0.65
RAB4AP20338 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.96□□□□□ -0.65
RAB4AP20338 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.96□□□□□ -0.65
RAB4AP20338 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC10.96□□□□□ -0.65
RAB4AP20338 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
RAB4AP20338 SPDYE9P-201ENST00000570642 692 ntBASIC10.96□□□□□ -0.65
RAB4AP20338 SPDYE10P-202ENST00000612005 668 ntBASIC10.96□□□□□ -0.65
RAB4AP20338 SPDYE8P-202ENST00000612377 668 ntBASIC10.96□□□□□ -0.65
RAB4AP20338 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB4AP20338 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB4AP20338 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.66
RAB4AP20338 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC10.96□□□□□ -0.66
RAB4AP20338 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
RAB4AP20338 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.66
RAB4AP20338 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB4AP20338 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB4AP20338 AL021155.1-201ENST00000438808 2637 ntBASIC10.96□□□□□ -0.66
RAB4AP20338 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
RAB4AP20338 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB4AP20338 GPR26-201ENST00000284674 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB4AP20338 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB4AP20338 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB4AP20338 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB4AP20338 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
RAB4AP20338 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.96□□□□□ -0.66
RAB4AP20338 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC10.96□□□□□ -0.66
RAB4AP20338 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.96□□□□□ -0.66
RAB4AP20338 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
RAB4AP20338 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.96□□□□□ -0.66
RAB4AP20338 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC10.95□□□□□ -0.66
RAB4AP20338 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 ITIH5-209ENST00000613909 2916 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB4AP20338 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
RAB4AP20338 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 AC009474.1-201ENST00000455096 1565 ntBASIC10.95□□□□□ -0.66
RAB4AP20338 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.95□□□□□ -0.66
RAB4AP20338 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.95□□□□□ -0.66
RAB4AP20338 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.95□□□□□ -0.66
RAB4AP20338 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.95□□□□□ -0.66
RAB4AP20338 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC10.95□□□□□ -0.66
RAB4AP20338 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
RAB4AP20338 CXCL13-201ENST00000286758 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
RAB4AP20338 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
RAB4AP20338 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 NEK7-201ENST00000367383 586 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB4AP20338 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
RAB4AP20338 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 KRT18P64-201ENST00000434946 1219 ntBASIC10.95□□□□□ -0.66
RAB4AP20338 AC079781.3-201ENST00000449110 356 ntBASIC10.95□□□□□ -0.66
RAB4AP20338 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.95□□□□□ -0.66
RAB4AP20338 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC10.95□□□□□ -0.66
RAB4AP20338 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC10.95□□□□□ -0.66
RAB4AP20338 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.95□□□□□ -0.66
RAB4AP20338 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
RAB4AP20338 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.95□□□□□ -0.66
RAB4AP20338 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC10.95□□□□□ -0.66
RAB4AP20338 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
RAB4AP20338 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
RAB4AP20338 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
RAB4AP20338 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB4AP20338 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB4AP20338 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms