Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 RN7SL277P-201ENST00000481521 288 ntBASIC14.36□□□□□ -0.11
HLA-DPA1P20036 RN7SL530P-201ENST00000485097 298 ntBASIC14.36□□□□□ -0.11
HLA-DPA1P20036 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 AL022334.2-201ENST00000610000 484 ntBASIC14.36□□□□□ -0.11
HLA-DPA1P20036 AC100757.4-201ENST00000626934 759 ntBASIC14.36□□□□□ -0.11
HLA-DPA1P20036 AL805961.1-203ENST00000641078 1258 ntBASIC14.36□□□□□ -0.11
HLA-DPA1P20036 NAP1L6-202ENST00000641404 1222 ntBASIC14.36□□□□□ -0.11
HLA-DPA1P20036 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.36□□□□□ -0.11
HLA-DPA1P20036 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 AC010327.5-201ENST00000586923 3061 ntBASIC14.35□□□□□ -0.11
HLA-DPA1P20036 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.35□□□□□ -0.11
HLA-DPA1P20036 AL008707.1-201ENST00000422498 534 ntBASIC14.35□□□□□ -0.11
HLA-DPA1P20036 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 AC099548.2-209ENST00000480264 625 ntBASIC14.35□□□□□ -0.11
HLA-DPA1P20036 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 AC020914.3-201ENST00000594712 304 ntBASIC14.35□□□□□ -0.11
HLA-DPA1P20036 AL645939.5-201ENST00000606834 243 ntBASIC14.35□□□□□ -0.11
HLA-DPA1P20036 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 AL928654.5-201ENST00000624831 2501 ntBASIC14.35□□□□□ -0.11
HLA-DPA1P20036 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DPA1P20036 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPA1P20036 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DPA1P20036 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DPA1P20036 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPA1P20036 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HLA-DPA1P20036 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPA1P20036 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPA1P20036 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DPA1P20036 LINC01165-201ENST00000445190 1623 ntBASIC14.34□□□□□ -0.11
HLA-DPA1P20036 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms