Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL2P13500 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL2P13500 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL2P13500 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL2P13500 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL2P13500 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL2P13500 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL2P13500 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL2P13500 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL2P13500 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
CCL2P13500 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL2P13500 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CCL2P13500 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL2P13500 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL2P13500 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CCL2P13500 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL2P13500 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL2P13500 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CCL2P13500 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
CCL2P13500 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.42□□□□□ -0.42
CCL2P13500 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL2P13500 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.42□□□□□ -0.42
CCL2P13500 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.42□□□□□ -0.42
CCL2P13500 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL2P13500 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.42□□□□□ -0.42
CCL2P13500 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL2P13500 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL2P13500 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL2P13500 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL2P13500 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL2P13500 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL2P13500 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CCL2P13500 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CCL2P13500 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CCL2P13500 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL2P13500 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL2P13500 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL2P13500 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL2P13500 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL2P13500 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL2P13500 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CCL2P13500 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CCL2P13500 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL2P13500 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL2P13500 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL2P13500 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.41□□□□□ -0.42
CCL2P13500 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL2P13500 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.41□□□□□ -0.42
CCL2P13500 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL2P13500 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CCL2P13500 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL2P13500 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL2P13500 AL512310.5-201ENST00000551999 515 ntBASIC12.41□□□□□ -0.42
CCL2P13500 KRT8P24-201ENST00000560290 1559 ntBASIC12.41□□□□□ -0.42
CCL2P13500 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.41□□□□□ -0.42
CCL2P13500 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL2P13500 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
CCL2P13500 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms