Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SFTPBP07988 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SFTPBP07988 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SFTPBP07988 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
SFTPBP07988 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SFTPBP07988 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SFTPBP07988 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
SFTPBP07988 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SFTPBP07988 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.48□□□□□ -0.41
SFTPBP07988 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.48□□□□□ -0.41
SFTPBP07988 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SFTPBP07988 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SFTPBP07988 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
SFTPBP07988 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.47□□□□□ -0.41
SFTPBP07988 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SFTPBP07988 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.47□□□□□ -0.41
SFTPBP07988 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.47□□□□□ -0.41
SFTPBP07988 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.47□□□□□ -0.41
SFTPBP07988 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
SFTPBP07988 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.47□□□□□ -0.41
SFTPBP07988 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.47□□□□□ -0.41
SFTPBP07988 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.47□□□□□ -0.41
SFTPBP07988 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.47□□□□□ -0.41
SFTPBP07988 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.47□□□□□ -0.41
SFTPBP07988 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.47□□□□□ -0.41
SFTPBP07988 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.47□□□□□ -0.41
SFTPBP07988 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.47□□□□□ -0.41
SFTPBP07988 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.47□□□□□ -0.41
SFTPBP07988 AC132938.4-201ENST00000623835 848 ntBASIC12.47□□□□□ -0.41
SFTPBP07988 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
SFTPBP07988 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.47□□□□□ -0.41
SFTPBP07988 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.47□□□□□ -0.41
SFTPBP07988 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.47□□□□□ -0.41
SFTPBP07988 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SFTPBP07988 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.46□□□□□ -0.41
SFTPBP07988 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SFTPBP07988 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.46□□□□□ -0.41
SFTPBP07988 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SFTPBP07988 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.46□□□□□ -0.41
SFTPBP07988 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.46□□□□□ -0.41
SFTPBP07988 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.46□□□□□ -0.41
SFTPBP07988 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.46□□□□□ -0.41
SFTPBP07988 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SFTPBP07988 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SFTPBP07988 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SFTPBP07988 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms