Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 AC016397.2-201ENST00000624848 1985 ntBASIC16.99■□□□□ 0.31
POLR3DP05423 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.99■□□□□ 0.31
POLR3DP05423 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.99■□□□□ 0.31
POLR3DP05423 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
POLR3DP05423 AL627422.1-201ENST00000434104 580 ntBASIC16.99■□□□□ 0.31
POLR3DP05423 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.99■□□□□ 0.31
POLR3DP05423 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.99■□□□□ 0.31
POLR3DP05423 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.99■□□□□ 0.31
POLR3DP05423 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
POLR3DP05423 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.99■□□□□ 0.31
POLR3DP05423 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.99■□□□□ 0.31
POLR3DP05423 AC138894.2-201ENST00000602838 371 ntBASIC16.99■□□□□ 0.31
POLR3DP05423 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.99■□□□□ 0.31
POLR3DP05423 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
POLR3DP05423 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
POLR3DP05423 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.99■□□□□ 0.31
POLR3DP05423 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.99■□□□□ 0.31
POLR3DP05423 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
POLR3DP05423 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.98■□□□□ 0.31
POLR3DP05423 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
POLR3DP05423 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
POLR3DP05423 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
POLR3DP05423 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.98■□□□□ 0.31
POLR3DP05423 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.98■□□□□ 0.31
POLR3DP05423 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.98■□□□□ 0.31
POLR3DP05423 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.98■□□□□ 0.31
POLR3DP05423 AC078991.1-201ENST00000437297 610 ntBASIC16.98■□□□□ 0.31
POLR3DP05423 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 NDUFS6P1-201ENST00000485187 316 ntBASIC16.98■□□□□ 0.31
POLR3DP05423 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.98■□□□□ 0.31
POLR3DP05423 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.98■□□□□ 0.31
POLR3DP05423 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.98■□□□□ 0.31
POLR3DP05423 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.98■□□□□ 0.31
POLR3DP05423 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.98■□□□□ 0.31
POLR3DP05423 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.98■□□□□ 0.31
POLR3DP05423 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
POLR3DP05423 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
POLR3DP05423 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.98■□□□□ 0.31
POLR3DP05423 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.98■□□□□ 0.31
POLR3DP05423 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
POLR3DP05423 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR3DP05423 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
POLR3DP05423 LINC00115-201ENST00000473798 1317 ntBASIC16.97■□□□□ 0.31
POLR3DP05423 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 LINC01815-202ENST00000641468 1409 ntBASIC16.97■□□□□ 0.31
POLR3DP05423 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
POLR3DP05423 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
POLR3DP05423 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
POLR3DP05423 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
POLR3DP05423 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.97■□□□□ 0.31
POLR3DP05423 CHCHD2P9-201ENST00000461726 456 ntBASIC16.97■□□□□ 0.31
POLR3DP05423 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 AC092171.5-201ENST00000608012 942 ntBASIC16.97■□□□□ 0.31
POLR3DP05423 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.97■□□□□ 0.31
POLR3DP05423 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.97■□□□□ 0.31
POLR3DP05423 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
POLR3DP05423 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
POLR3DP05423 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms