Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.18□□□□□ -0.14
CAPNS1P04632 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.18□□□□□ -0.14
CAPNS1P04632 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPNS1P04632 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPNS1P04632 RPL8P2-201ENST00000430538 502 ntBASIC14.18□□□□□ -0.14
CAPNS1P04632 PSMD4P1-201ENST00000433951 1109 ntBASIC14.18□□□□□ -0.14
CAPNS1P04632 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.18□□□□□ -0.14
CAPNS1P04632 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.18□□□□□ -0.14
CAPNS1P04632 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPNS1P04632 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPNS1P04632 FAM86KP-201ENST00000509817 987 ntBASIC14.18□□□□□ -0.14
CAPNS1P04632 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.18□□□□□ -0.14
CAPNS1P04632 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.18□□□□□ -0.14
CAPNS1P04632 AC027237.1-201ENST00000560942 655 ntBASIC14.18□□□□□ -0.14
CAPNS1P04632 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.18□□□□□ -0.14
CAPNS1P04632 MIR5196-201ENST00000578146 115 ntBASIC14.18□□□□□ -0.14
CAPNS1P04632 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.18□□□□□ -0.14
CAPNS1P04632 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPNS1P04632 AL109837.1-201ENST00000603272 613 ntBASIC14.18□□□□□ -0.14
CAPNS1P04632 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CAPNS1P04632 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CAPNS1P04632 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPNS1P04632 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPNS1P04632 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPNS1P04632 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPNS1P04632 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPNS1P04632 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPNS1P04632 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC14.18□□□□□ -0.14
CAPNS1P04632 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPNS1P04632 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CAPNS1P04632 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPNS1P04632 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPNS1P04632 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CAPNS1P04632 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CAPNS1P04632 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CAPNS1P04632 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPNS1P04632 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPNS1P04632 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CAPNS1P04632 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.17□□□□□ -0.14
CAPNS1P04632 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CAPNS1P04632 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CAPNS1P04632 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 PTENP1-202ENST00000532280 3996 ntBASIC14.17□□□□□ -0.14
CAPNS1P04632 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CAPNS1P04632 BAK1P1-201ENST00000317045 636 ntBASIC14.17□□□□□ -0.14
CAPNS1P04632 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 AL592076.1-201ENST00000424448 303 ntBASIC14.17□□□□□ -0.14
CAPNS1P04632 BCAS2P2-201ENST00000425064 674 ntBASIC14.17□□□□□ -0.14
CAPNS1P04632 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.17□□□□□ -0.14
CAPNS1P04632 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPNS1P04632 AC004066.1-201ENST00000502488 802 ntBASIC14.17□□□□□ -0.14
CAPNS1P04632 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.17□□□□□ -0.14
CAPNS1P04632 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.17□□□□□ -0.14
CAPNS1P04632 AC006158.1-201ENST00000610661 249 ntBASIC14.17□□□□□ -0.14
CAPNS1P04632 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.17□□□□□ -0.14
CAPNS1P04632 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CAPNS1P04632 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPNS1P04632 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPNS1P04632 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.17□□□□□ -0.14
CAPNS1P04632 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CAPNS1P04632 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CAPNS1P04632 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
CAPNS1P04632 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPNS1P04632 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CAPNS1P04632 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPNS1P04632 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CAPNS1P04632 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CAPNS1P04632 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CAPNS1P04632 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPNS1P04632 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPNS1P04632 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPNS1P04632 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPNS1P04632 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CAPNS1P04632 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CAPNS1P04632 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.16□□□□□ -0.14
CAPNS1P04632 SHC1P1-201ENST00000425230 1745 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms