Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 USP17L6P-201ENST00000382470 1197 ntBASIC14.48□□□□□ -0.09
CCDC78A2IDD5 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.48□□□□□ -0.09
CCDC78A2IDD5 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 ST13P19-201ENST00000442505 1124 ntBASIC14.48□□□□□ -0.09
CCDC78A2IDD5 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 RNA5SP412-201ENST00000516234 123 ntBASIC14.48□□□□□ -0.09
CCDC78A2IDD5 SCARNA21-201ENST00000517026 139 ntBASIC14.48□□□□□ -0.09
CCDC78A2IDD5 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 AC021016.3-201ENST00000608367 477 ntBASIC14.48□□□□□ -0.09
CCDC78A2IDD5 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 AL033527.4-201ENST00000641026 673 ntBASIC14.48□□□□□ -0.09
CCDC78A2IDD5 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CCDC78A2IDD5 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 LAP3P2-201ENST00000454686 1454 ntBASIC14.47□□□□□ -0.09
CCDC78A2IDD5 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AC012441.2-201ENST00000444843 739 ntBASIC14.47□□□□□ -0.09
CCDC78A2IDD5 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 RPL18P13-201ENST00000478088 569 ntBASIC14.47□□□□□ -0.09
CCDC78A2IDD5 FAM86HP-204ENST00000513466 959 ntBASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AC124068.2-201ENST00000569473 1109 ntBASIC14.47□□□□□ -0.09
CCDC78A2IDD5 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AC092299.1-201ENST00000632679 757 ntBASIC14.47□□□□□ -0.09
CCDC78A2IDD5 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCDC78A2IDD5 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC78A2IDD5 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms