Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 SHC1P1-201ENST00000425230 1745 ntBASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN22Q8N7P3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 AP000437.1-201ENST00000624057 2085 ntBASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 AL355994.2-201ENST00000447882 704 ntBASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 AP006547.1-201ENST00000563435 692 ntBASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 TMBIM7P-202ENST00000641474 1516 ntBASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CLDN22Q8N7P3 PEG13-201ENST00000631594 5667 ntBASIC13□□□□□ -0.33
CLDN22Q8N7P3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN22Q8N7P3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN22Q8N7P3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13□□□□□ -0.33
CLDN22Q8N7P3 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13□□□□□ -0.33
CLDN22Q8N7P3 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN22Q8N7P3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13□□□□□ -0.33
CLDN22Q8N7P3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN22Q8N7P3 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CLDN22Q8N7P3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13□□□□□ -0.33
CLDN22Q8N7P3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN22Q8N7P3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN22Q8N7P3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN22Q8N7P3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13□□□□□ -0.33
CLDN22Q8N7P3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13□□□□□ -0.33
CLDN22Q8N7P3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDN22Q8N7P3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLDN22Q8N7P3 E2F3P2-201ENST00000447755 1422 ntBASIC13□□□□□ -0.33
CLDN22Q8N7P3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDN22Q8N7P3 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN22Q8N7P3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN22Q8N7P3 MIR326-201ENST00000362220 95 ntBASIC13□□□□□ -0.33
CLDN22Q8N7P3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDN22Q8N7P3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13□□□□□ -0.33
CLDN22Q8N7P3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms