Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP4BP1P59074 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
CHMP4BP1P59074 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CHMP4BP1P59074 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP4BP1P59074 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP4BP1P59074 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP4BP1P59074 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP4BP1P59074 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP4BP1P59074 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 AC087386.2-201ENST00000623212 4637 ntBASIC16.36■□□□□ 0.21
CHMP4BP1P59074 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 AC079112.1-201ENST00000454972 939 ntBASIC16.36■□□□□ 0.21
CHMP4BP1P59074 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 MIR4750-201ENST00000584564 56 ntBASIC16.36■□□□□ 0.21
CHMP4BP1P59074 BX088702.1-201ENST00000610784 235 ntBASIC16.36■□□□□ 0.21
CHMP4BP1P59074 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 AP003419.4-201ENST00000616071 517 ntBASIC16.36■□□□□ 0.21
CHMP4BP1P59074 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 COX6A1P2-201ENST00000620597 330 ntBASIC16.36■□□□□ 0.21
CHMP4BP1P59074 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 AC018629.1-201ENST00000623381 1736 ntBASIC16.36■□□□□ 0.21
CHMP4BP1P59074 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CHMP4BP1P59074 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 DGCR9-201ENST00000609630 2415 ntBASIC16.35■□□□□ 0.21
CHMP4BP1P59074 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 AL583805.1-201ENST00000391389 531 ntBASIC16.35■□□□□ 0.21
CHMP4BP1P59074 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 RN7SL181P-201ENST00000462921 277 ntBASIC16.35■□□□□ 0.21
CHMP4BP1P59074 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 AC026803.1-201ENST00000569130 274 ntBASIC16.35■□□□□ 0.21
CHMP4BP1P59074 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 LINC01783-202ENST00000614408 828 ntBASIC16.35■□□□□ 0.21
CHMP4BP1P59074 BX284668.2-205ENST00000619677 828 ntBASIC16.35■□□□□ 0.21
CHMP4BP1P59074 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 TCAF1P1-201ENST00000414990 2232 ntBASIC16.35■□□□□ 0.21
CHMP4BP1P59074 FAM90A2P-201ENST00000511144 1395 ntBASIC16.35■□□□□ 0.21
CHMP4BP1P59074 FAM90A25P-201ENST00000528404 1395 ntBASIC16.35■□□□□ 0.21
CHMP4BP1P59074 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms