Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.04□□□□□ -0.16
CDKN2DP55273 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2DP55273 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
CDKN2DP55273 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2DP55273 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDKN2DP55273 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2DP55273 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDKN2DP55273 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CDKN2DP55273 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN2DP55273 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2DP55273 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CDKN2DP55273 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDKN2DP55273 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.04□□□□□ -0.16
CDKN2DP55273 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN2DP55273 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2DP55273 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2DP55273 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2DP55273 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN2DP55273 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CDKN2DP55273 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2DP55273 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN2DP55273 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.04□□□□□ -0.16
CDKN2DP55273 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDKN2DP55273 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDKN2DP55273 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.03□□□□□ -0.16
CDKN2DP55273 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDKN2DP55273 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.03□□□□□ -0.16
CDKN2DP55273 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CDKN2DP55273 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.03□□□□□ -0.16
CDKN2DP55273 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.03□□□□□ -0.16
CDKN2DP55273 RN7SL277P-201ENST00000481521 288 ntBASIC14.03□□□□□ -0.16
CDKN2DP55273 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.03□□□□□ -0.16
CDKN2DP55273 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.03□□□□□ -0.16
CDKN2DP55273 MIR3615-201ENST00000581999 87 ntBASIC14.03□□□□□ -0.16
CDKN2DP55273 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.03□□□□□ -0.16
CDKN2DP55273 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.03□□□□□ -0.16
CDKN2DP55273 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDKN2DP55273 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CDKN2DP55273 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN2DP55273 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN2DP55273 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 MIR497HG-202ENST00000572453 3838 ntBASIC14.02□□□□□ -0.16
CDKN2DP55273 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.02□□□□□ -0.16
CDKN2DP55273 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.02□□□□□ -0.16
CDKN2DP55273 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.02□□□□□ -0.16
CDKN2DP55273 BRD7P5-201ENST00000299197 1822 ntBASIC14.02□□□□□ -0.16
CDKN2DP55273 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.02□□□□□ -0.16
CDKN2DP55273 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.02□□□□□ -0.16
CDKN2DP55273 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.02□□□□□ -0.16
CDKN2DP55273 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 ABCD1P2-201ENST00000429313 1601 ntBASIC14.02□□□□□ -0.16
CDKN2DP55273 AL359845.1-201ENST00000458202 1648 ntBASIC14.02□□□□□ -0.16
CDKN2DP55273 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.02□□□□□ -0.16
CDKN2DP55273 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN2DP55273 RPL13AP3-202ENST00000494676 1473 ntBASIC14.02□□□□□ -0.16
CDKN2DP55273 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDKN2DP55273 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.02□□□□□ -0.17
CDKN2DP55273 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.02□□□□□ -0.17
CDKN2DP55273 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.02□□□□□ -0.17
CDKN2DP55273 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms