Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN1P35523 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN1P35523 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCN1P35523 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCN1P35523 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCN1P35523 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCN1P35523 CTBP2P3-201ENST00000585629 1255 ntBASIC16.26■□□□□ 0.19
CLCN1P35523 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.26■□□□□ 0.19
CLCN1P35523 BX539320.1-201ENST00000623759 877 ntBASIC16.26■□□□□ 0.19
CLCN1P35523 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCN1P35523 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN1P35523 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN1P35523 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CLCN1P35523 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCN1P35523 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN1P35523 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN1P35523 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN1P35523 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCN1P35523 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLCN1P35523 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN1P35523 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN1P35523 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN1P35523 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN1P35523 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 SHC1P1-201ENST00000425230 1745 ntBASIC16.25■□□□□ 0.19
CLCN1P35523 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN1P35523 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN1P35523 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CLCN1P35523 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 AC087499.6-201ENST00000411576 835 ntBASIC16.25■□□□□ 0.19
CLCN1P35523 NUS1P3-201ENST00000423502 862 ntBASIC16.25■□□□□ 0.19
CLCN1P35523 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.25■□□□□ 0.19
CLCN1P35523 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.25■□□□□ 0.19
CLCN1P35523 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN1P35523 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.25■□□□□ 0.19
CLCN1P35523 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.25■□□□□ 0.19
CLCN1P35523 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.25■□□□□ 0.19
CLCN1P35523 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.25■□□□□ 0.19
CLCN1P35523 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.25■□□□□ 0.19
CLCN1P35523 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.25■□□□□ 0.19
CLCN1P35523 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN1P35523 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.25■□□□□ 0.19
CLCN1P35523 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN1P35523 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.25■□□□□ 0.19
CLCN1P35523 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.25■□□□□ 0.19
CLCN1P35523 OR13I1P-201ENST00000609811 1264 ntBASIC16.25■□□□□ 0.19
CLCN1P35523 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CLCN1P35523 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.25■□□□□ 0.19
CLCN1P35523 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.25■□□□□ 0.19
CLCN1P35523 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCN1P35523 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.25■□□□□ 0.19
CLCN1P35523 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CLCN1P35523 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCN1P35523 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.24■□□□□ 0.19
CLCN1P35523 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.24■□□□□ 0.19
CLCN1P35523 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN1P35523 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 TUBB8P4-201ENST00000511806 1324 ntBASIC16.24■□□□□ 0.19
CLCN1P35523 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.24■□□□□ 0.19
CLCN1P35523 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 DDO-201ENST00000368923 1953 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN1P35523 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CLCN1P35523 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN1P35523 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CLCN1P35523 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CLCN1P35523 AL139094.1-201ENST00000405549 1188 ntBASIC16.24■□□□□ 0.19
CLCN1P35523 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN1P35523 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN1P35523 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.24■□□□□ 0.19
CLCN1P35523 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLCN1P35523 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN1P35523 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CLCN1P35523 AP001582.1-201ENST00000525856 295 ntBASIC16.24■□□□□ 0.19
CLCN1P35523 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN1P35523 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN1P35523 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.24■□□□□ 0.19
CLCN1P35523 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.24■□□□□ 0.19
CLCN1P35523 AP001002.2-201ENST00000625137 386 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms