Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXD12P35452 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.28□□□□□ -0.12
HOXD12P35452 AL136172.1-201ENST00000598590 1394 ntBASIC14.28□□□□□ -0.12
HOXD12P35452 SIGLEC22P-201ENST00000599104 714 ntBASIC14.28□□□□□ -0.12
HOXD12P35452 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.28□□□□□ -0.12
HOXD12P35452 AC087481.3-201ENST00000602886 1894 ntBASIC14.28□□□□□ -0.12
HOXD12P35452 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.28□□□□□ -0.12
HOXD12P35452 AC136621.1-201ENST00000624017 2304 ntBASIC14.28□□□□□ -0.12
HOXD12P35452 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HOXD12P35452 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HOXD12P35452 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HOXD12P35452 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HOXD12P35452 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
HOXD12P35452 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HOXD12P35452 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HOXD12P35452 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
HOXD12P35452 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HOXD12P35452 AC013726.1-201ENST00000563747 2285 ntBASIC14.27□□□□□ -0.12
HOXD12P35452 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HOXD12P35452 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HOXD12P35452 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
HOXD12P35452 AC139712.1-201ENST00000378256 1875 ntBASIC14.27□□□□□ -0.12
HOXD12P35452 AC020658.6-201ENST00000623564 1870 ntBASIC14.27□□□□□ -0.12
HOXD12P35452 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HOXD12P35452 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HOXD12P35452 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
HOXD12P35452 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.27□□□□□ -0.12
HOXD12P35452 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HOXD12P35452 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HOXD12P35452 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
HOXD12P35452 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HOXD12P35452 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.27□□□□□ -0.12
HOXD12P35452 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HOXD12P35452 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.27□□□□□ -0.12
HOXD12P35452 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HOXD12P35452 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HOXD12P35452 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HOXD12P35452 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 OR5BD1P-201ENST00000532527 817 ntBASIC14.27□□□□□ -0.13
HOXD12P35452 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HOXD12P35452 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
HOXD12P35452 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.27□□□□□ -0.13
HOXD12P35452 AC244250.3-201ENST00000620749 366 ntBASIC14.27□□□□□ -0.13
HOXD12P35452 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.27□□□□□ -0.13
HOXD12P35452 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
HOXD12P35452 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.27□□□□□ -0.13
HOXD12P35452 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.27□□□□□ -0.13
HOXD12P35452 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.27□□□□□ -0.13
HOXD12P35452 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.27□□□□□ -0.13
HOXD12P35452 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HOXD12P35452 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.27□□□□□ -0.13
HOXD12P35452 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HOXD12P35452 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.26□□□□□ -0.13
HOXD12P35452 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.26□□□□□ -0.13
HOXD12P35452 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HOXD12P35452 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.26□□□□□ -0.13
HOXD12P35452 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.26□□□□□ -0.13
HOXD12P35452 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.26□□□□□ -0.13
HOXD12P35452 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HOXD12P35452 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.26□□□□□ -0.13
HOXD12P35452 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HOXD12P35452 RN7SL23P-201ENST00000484055 275 ntBASIC14.26□□□□□ -0.13
HOXD12P35452 LINC00634-202ENST00000505157 222 ntBASIC14.26□□□□□ -0.13
HOXD12P35452 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.26□□□□□ -0.13
HOXD12P35452 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.26□□□□□ -0.13
HOXD12P35452 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms