Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.49□□□□□ -0.09
PTPN3P26045 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
PTPN3P26045 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.49□□□□□ -0.09
PTPN3P26045 EIF4HP1-201ENST00000453115 687 ntBASIC14.49□□□□□ -0.09
PTPN3P26045 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 GOLGA2P8-201ENST00000505201 779 ntBASIC14.49□□□□□ -0.09
PTPN3P26045 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
PTPN3P26045 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.49□□□□□ -0.09
PTPN3P26045 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.49□□□□□ -0.09
PTPN3P26045 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.49□□□□□ -0.09
PTPN3P26045 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.49□□□□□ -0.09
PTPN3P26045 MIR3188-201ENST00000583494 85 ntBASIC14.49□□□□□ -0.09
PTPN3P26045 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PTPN3P26045 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PTPN3P26045 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.49□□□□□ -0.09
PTPN3P26045 AL022334.2-201ENST00000610000 484 ntBASIC14.49□□□□□ -0.09
PTPN3P26045 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.49□□□□□ -0.09
PTPN3P26045 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.49□□□□□ -0.09
PTPN3P26045 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.49□□□□□ -0.09
PTPN3P26045 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 KRT8P21-201ENST00000430398 1491 ntBASIC14.49□□□□□ -0.09
PTPN3P26045 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
PTPN3P26045 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 AC068760.1-201ENST00000493579 1953 ntBASIC14.49□□□□□ -0.09
PTPN3P26045 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PTPN3P26045 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.49□□□□□ -0.09
PTPN3P26045 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PTPN3P26045 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PTPN3P26045 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
PTPN3P26045 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.48□□□□□ -0.09
PTPN3P26045 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.48□□□□□ -0.09
PTPN3P26045 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.48□□□□□ -0.09
PTPN3P26045 MIR6752-201ENST00000618442 71 ntBASIC14.48□□□□□ -0.09
PTPN3P26045 CR392039.2-201ENST00000623182 509 ntBASIC14.48□□□□□ -0.09
PTPN3P26045 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
PTPN3P26045 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.48□□□□□ -0.09
PTPN3P26045 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.48□□□□□ -0.09
PTPN3P26045 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN3P26045 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.48□□□□□ -0.09
PTPN3P26045 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PTPN3P26045 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
PTPN3P26045 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.47□□□□□ -0.09
PTPN3P26045 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN3P26045 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms