Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.36□□□□□ -0.43
EPHA1P21709 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.36□□□□□ -0.43
EPHA1P21709 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
EPHA1P21709 ELK2AP-201ENST00000392510 1007 ntBASIC12.36□□□□□ -0.43
EPHA1P21709 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.36□□□□□ -0.43
EPHA1P21709 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.36□□□□□ -0.43
EPHA1P21709 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.36□□□□□ -0.43
EPHA1P21709 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.36□□□□□ -0.43
EPHA1P21709 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 AC022616.1-201ENST00000518688 554 ntBASIC12.36□□□□□ -0.43
EPHA1P21709 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC12.36□□□□□ -0.43
EPHA1P21709 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.36□□□□□ -0.43
EPHA1P21709 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
EPHA1P21709 RN7SL190P-201ENST00000582519 257 ntBASIC12.36□□□□□ -0.43
EPHA1P21709 PPY2P-201ENST00000582808 702 ntBASIC12.36□□□□□ -0.43
EPHA1P21709 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 NDUFV2P1-201ENST00000596415 907 ntBASIC12.36□□□□□ -0.43
EPHA1P21709 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.36□□□□□ -0.43
EPHA1P21709 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
EPHA1P21709 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.36□□□□□ -0.43
EPHA1P21709 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 AC105206.1-202ENST00000314927 2368 ntBASIC12.36□□□□□ -0.43
EPHA1P21709 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
EPHA1P21709 AL805961.2-201ENST00000642139 4817 ntBASIC12.36□□□□□ -0.43
EPHA1P21709 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EPHA1P21709 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.36□□□□□ -0.43
EPHA1P21709 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
EPHA1P21709 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
EPHA1P21709 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 AC023090.2-201ENST00000625182 2110 ntBASIC12.35□□□□□ -0.43
EPHA1P21709 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
EPHA1P21709 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
EPHA1P21709 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
EPHA1P21709 AC090114.2-201ENST00000608477 7054 ntBASIC12.35□□□□□ -0.43
EPHA1P21709 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.35□□□□□ -0.43
EPHA1P21709 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.35□□□□□ -0.43
EPHA1P21709 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC12.35□□□□□ -0.43
EPHA1P21709 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.35□□□□□ -0.43
EPHA1P21709 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.35□□□□□ -0.43
EPHA1P21709 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 EIF4HP1-201ENST00000453115 687 ntBASIC12.35□□□□□ -0.43
EPHA1P21709 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.35□□□□□ -0.43
EPHA1P21709 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 HIST2H2BC-201ENST00000498492 580 ntBASIC12.35□□□□□ -0.43
EPHA1P21709 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 AL451050.2-201ENST00000606967 682 ntBASIC12.35□□□□□ -0.43
EPHA1P21709 AC007663.3-201ENST00000609632 465 ntBASIC12.35□□□□□ -0.43
EPHA1P21709 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.35□□□□□ -0.43
EPHA1P21709 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.35□□□□□ -0.43
EPHA1P21709 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
EPHA1P21709 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms