Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RB1P06400 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RB1P06400 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RB1P06400 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.87□□□□□ -0.03
RB1P06400 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.87□□□□□ -0.03
RB1P06400 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.87□□□□□ -0.03
RB1P06400 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 AL137244.1-201ENST00000422931 865 ntBASIC14.87□□□□□ -0.03
RB1P06400 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RB1P06400 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 TBC1D3P6-201ENST00000505954 962 ntBASIC14.87□□□□□ -0.03
RB1P06400 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC14.87□□□□□ -0.03
RB1P06400 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.87□□□□□ -0.03
RB1P06400 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC14.87□□□□□ -0.03
RB1P06400 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 FTLP5-201ENST00000586853 534 ntBASIC14.87□□□□□ -0.03
RB1P06400 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14.87□□□□□ -0.03
RB1P06400 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 PHF23-213ENST00000613632 850 ntTSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 AC113385.2-201ENST00000614465 762 ntBASIC14.87□□□□□ -0.03
RB1P06400 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RB1P06400 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 AC091951.1-201ENST00000512854 2465 ntBASIC14.87□□□□□ -0.03
RB1P06400 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RB1P06400 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RB1P06400 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.86□□□□□ -0.03
RB1P06400 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.86□□□□□ -0.03
RB1P06400 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.86□□□□□ -0.03
RB1P06400 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.86□□□□□ -0.03
RB1P06400 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.86□□□□□ -0.03
RB1P06400 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.86□□□□□ -0.03
RB1P06400 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
RB1P06400 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.86□□□□□ -0.03
RB1P06400 RPS18P9-201ENST00000482817 460 ntBASIC14.86□□□□□ -0.03
RB1P06400 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.86□□□□□ -0.03
RB1P06400 URB1-AS1-201ENST00000534991 831 ntBASIC14.86□□□□□ -0.03
RB1P06400 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC14.86□□□□□ -0.03
RB1P06400 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RB1P06400 AC126755.5-201ENST00000622756 267 ntBASIC14.86□□□□□ -0.03
RB1P06400 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RB1P06400 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.86□□□□□ -0.03
RB1P06400 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
RB1P06400 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.86□□□□□ -0.03
RB1P06400 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
RB1P06400 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.86□□□□□ -0.03
RB1P06400 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 AC020931.1-201ENST00000589622 1346 ntBASIC14.86□□□□□ -0.03
RB1P06400 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RB1P06400 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RB1P06400 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
RB1P06400 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.86□□□□□ -0.03
RB1P06400 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RB1P06400 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms