Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.29□□□□□ -0.12
SMAD6O43541 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SMAD6O43541 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.29□□□□□ -0.12
SMAD6O43541 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 PYY2-201ENST00000315776 282 ntBASIC14.29□□□□□ -0.12
SMAD6O43541 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.29□□□□□ -0.12
SMAD6O43541 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.29□□□□□ -0.12
SMAD6O43541 AC098934.1-203ENST00000442868 1262 ntBASIC14.29□□□□□ -0.12
SMAD6O43541 ERP29P1-201ENST00000442902 706 ntBASIC14.29□□□□□ -0.12
SMAD6O43541 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.29□□□□□ -0.12
SMAD6O43541 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.29□□□□□ -0.12
SMAD6O43541 RN7SL788P-201ENST00000460504 316 ntBASIC14.29□□□□□ -0.12
SMAD6O43541 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.29□□□□□ -0.12
SMAD6O43541 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.29□□□□□ -0.12
SMAD6O43541 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.29□□□□□ -0.12
SMAD6O43541 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.29□□□□□ -0.12
SMAD6O43541 MIR4722-201ENST00000578292 60 ntBASIC14.29□□□□□ -0.12
SMAD6O43541 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.29□□□□□ -0.12
SMAD6O43541 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SMAD6O43541 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SMAD6O43541 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.29□□□□□ -0.12
SMAD6O43541 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SMAD6O43541 AC111170.3-201ENST00000624282 2464 ntBASIC14.29□□□□□ -0.12
SMAD6O43541 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMAD6O43541 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.29□□□□□ -0.12
SMAD6O43541 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SMAD6O43541 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.28□□□□□ -0.12
SMAD6O43541 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SMAD6O43541 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SMAD6O43541 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.28□□□□□ -0.12
SMAD6O43541 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
SMAD6O43541 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 AC098935.1-201ENST00000446057 611 ntBASIC14.28□□□□□ -0.12
SMAD6O43541 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.28□□□□□ -0.12
SMAD6O43541 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SMAD6O43541 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SMAD6O43541 SCARNA12-201ENST00000459155 270 ntBASIC14.28□□□□□ -0.12
SMAD6O43541 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SMAD6O43541 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.28□□□□□ -0.12
SMAD6O43541 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.28□□□□□ -0.12
SMAD6O43541 AP002803.1-201ENST00000528836 498 ntBASIC14.28□□□□□ -0.12
SMAD6O43541 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.28□□□□□ -0.12
SMAD6O43541 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.28□□□□□ -0.12
SMAD6O43541 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.28□□□□□ -0.12
SMAD6O43541 HERC2P11-201ENST00000562845 725 ntBASIC14.28□□□□□ -0.12
SMAD6O43541 AC135983.4-201ENST00000564116 1262 ntBASIC14.28□□□□□ -0.12
SMAD6O43541 AC100756.2-201ENST00000569537 736 ntBASIC14.28□□□□□ -0.12
SMAD6O43541 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.28□□□□□ -0.12
SMAD6O43541 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SMAD6O43541 SPCS2P2-201ENST00000603270 608 ntBASIC14.28□□□□□ -0.12
SMAD6O43541 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMAD6O43541 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms